Ss1.1-Ova2-C0003271_H02.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CACTTCTGATCCTAGCCCTTGTGGGAGCTGCTGTTGCTTTCCCTTTGGAGGATGATGACA AGATCGTTGGAGGATACACCTGCCCGGAACATTCTGTCCCCTACCAGGTGTCACTGAACT CTGGCTACCACTTCTGTGGAGGTTCCCTCATCAATGACCAGTGGGTGGTGTCTGCAGCTC ACTGCTACAAATCCCGCATCCAAGTGAGACTGGGAGAGCACAACATCAATGTCCTTGAGG GCGATGAGCAATTTATCAATGCTGCCAAGATCATCAAGCACCCCAACTATAGTTCGTGGA CCCTGAACAATGACATCATGCTGATCAAGCTCTCTTCCCCTGTGAAACTCAATGCCCGAG TGGCCCCTGTAGCTCTGCCCAGCGCCTGTGCACCTGCAGGCACTCAGTGCCTCATCTCTG GCTGGGGCAACACCCTCAGCAATGGTGTGAACAACCCAGACCTGCTCCAATGCGTGGATG CCCCAGTGCTGTCTCAGGCTGACTGTGAAGCCGCCTACCCTGGGGAAATCACCAGCAGCA TGATTTGTGTTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CACTTCTGATCCTAGCCCTTGTGGGAGCTGCTGTTGCTTTCCCTTTGGAGGATGATGACA AGATCGTTGGAGGATACACCTGCCCGGAACATTCTGTCCCCTACCAGGTGTCACTGAACT CTGGCTACCACTTCTGTGGAGGTTCCCTCATCAATGACCAGTGGGTGGTGTCTGCAGCTC ACTGCTACAAATCCCGCATCCAAGTGAGACTGGGAGAGCACAACATCAATGTCCTTGAGG GCGATGAGCAATTTATCAATGCTGCCAAGATCATCAAGCACCCCAACTATAGTTCGTGGA CCCTGAACAATGACATCATGCTGATCAAGCTCTCTTCCCCTGTGAAACTCAATGCCCGAG TGGCCCCTGTAGCTCTGCCCAGCGCCTGTGCACCTGCAGGCACTCAGTGCCTCATCTCTG GCTGGGGCAACACCCTCAGCAATGGTGTGAACAACCCAGACCTGCTCCAATGCGTGGATG CCCCAGTGCTGTCTCAGGCTGACTGTGAAGCCGCCTACCCTGGGGAAATCACCAGCAGCA TGATTTGTGTTG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 33-126, + strand, RNAz p=0.587683 | |
| 76-193, - strand, RNAz p=0.766312 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 33-126, + strand, RNAz p=0.587683 | |
| 76-193, - strand, RNAz p=0.766312 |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 33-193, gnl|bosTau2|chr4 (57966389-57966549) | |
| 33-193, gnl|canFam2|chr16 (9759178-9758997) | |
| 33-193, gnl|danRer3|chrUn (46071548-46071713) | |
| 33-193, gnl|dasNov1|scaffold_196976 (972-1145) | |
| 33-193, gnl|echTel1|scaffold_104043 (2651-2824) | |
| 33-193, gnl|fr1|chrUn (324143863-324144036) | |
| 33-193, gnl|galGal2|chr1 (72207082-72206898) | |
| 33-193, gnl|hg17|chr7 (141966197-141966378) | |
| 33-193, gnl|Hg17|chr9 (33786640-33786800) | |
| 33-193, gnl|loxAfr1|scaffold_34535 (5637-5807) | |
| 33-193, gnl|mm7|chr6 (41325729-41325906) | |
| 33-193, gnl|Mm7|chr6 (40964937-40964774) | |
| 33-193, gnl|monDom2|scaffold_7 (517087-516916) | |
| 33-193, gnl|oryCun1|scaffold_208763 (59678-59492) | |
| 33-193, gnl|panTro1|chr6 (144762352-144762533) | |
| 33-193, gnl|rheMac2|chr3 (180363384-180363565) | |
| 33-193, gnl|rn3|chr4 (69407384-69407557) | |
| 33-193, gnl|tetNig1|chr8 (5823940-5824126) | |
| 33-193, gnl|xenTro1|scaffold_1284 (30702-30530) | |
| 194-445, gnl|bosTau2|chr4 (60571277-60571026) | |
| 194-445, gnl|canFam2|chr16 (9758133-9757925) | |
| 194-445, gnl|danRer3|chr17 (30061627-30061835) | |
| 194-445, gnl|dasNov1|scaffold_4972 (42747-42540) | |
| 194-445, gnl|echTel1|scaffold_104043 (3507-3716) | |
| 194-445, gnl|fr1|chrUn (42730109-42729901) | |
| 194-445, gnl|galGal2|chr1 (72229759-72229552) | |
| 194-445, gnl|Hg17|chr7 (141977510-141977761) | |
| 194-445, gnl|hg17|chr9 (33787824-33788032) | |
| 194-445, gnl|loxAfr1|scaffold_34535 (6760-6967) | |
| 194-445, gnl|mm7|chr6 (41235393-41235601) | |
| 194-445, gnl|Mm7|chr6 (41454925-41455176) | |
| 194-445, gnl|monDom2|scaffold_7 (856085-856293) | |
| 194-445, gnl|oryCun1|scaffold_188859 (15856-15648) | |
| 194-445, gnl|panTro1|chr11 (34308374-34308582) | |
| 194-445, gnl|rheMac2|chr3 (180314515-180314723) | |
| 194-445, gnl|rn3|chr4 (69290322-69290530) | |
| 194-445, gnl|tetNig1|chr8 (5826123-5826331) | |
| 194-445, gnl|xenTro1|scaffold_1284 (47110-46904) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 33-193, gnl|bosTau2|chr4 (57966389-57966549) | |
| 33-193, gnl|canFam2|chr16 (9759178-9758997) | |
| 33-193, gnl|danRer3|chrUn (46071548-46071713) | |
| 33-193, gnl|dasNov1|scaffold_196976 (972-1145) | |
| 33-193, gnl|echTel1|scaffold_104043 (2651-2824) | |
| 33-193, gnl|fr1|chrUn (324143863-324144036) | |
| 33-193, gnl|galGal2|chr1 (72207082-72206898) | |
| 33-193, gnl|hg17|chr7 (141966197-141966378) | |
| 33-193, gnl|Hg17|chr9 (33786640-33786800) | |
| 33-193, gnl|loxAfr1|scaffold_34535 (5637-5807) | |
| 33-193, gnl|mm7|chr6 (41325729-41325906) | |
| 33-193, gnl|Mm7|chr6 (40964937-40964774) | |
| 33-193, gnl|monDom2|scaffold_7 (517087-516916) | |
| 33-193, gnl|oryCun1|scaffold_208763 (59678-59492) | |
| 33-193, gnl|panTro1|chr6 (144762352-144762533) | |
| 33-193, gnl|rheMac2|chr3 (180363384-180363565) | |
| 33-193, gnl|rn3|chr4 (69407384-69407557) | |
| 33-193, gnl|tetNig1|chr8 (5823940-5824126) | |
| 33-193, gnl|xenTro1|scaffold_1284 (30702-30530) | |
| 194-445, gnl|bosTau2|chr4 (60571277-60571026) | |
| 194-445, gnl|canFam2|chr16 (9758133-9757925) | |
| 194-445, gnl|danRer3|chr17 (30061627-30061835) | |
| 194-445, gnl|dasNov1|scaffold_4972 (42747-42540) | |
| 194-445, gnl|echTel1|scaffold_104043 (3507-3716) | |
| 194-445, gnl|fr1|chrUn (42730109-42729901) | |
| 194-445, gnl|galGal2|chr1 (72229759-72229552) | |
| 194-445, gnl|Hg17|chr7 (141977510-141977761) | |
| 194-445, gnl|hg17|chr9 (33787824-33788032) | |
| 194-445, gnl|loxAfr1|scaffold_34535 (6760-6967) | |
| 194-445, gnl|mm7|chr6 (41235393-41235601) | |
| 194-445, gnl|Mm7|chr6 (41454925-41455176) | |
| 194-445, gnl|monDom2|scaffold_7 (856085-856293) | |
| 194-445, gnl|oryCun1|scaffold_188859 (15856-15648) | |
| 194-445, gnl|panTro1|chr11 (34308374-34308582) | |
| 194-445, gnl|rheMac2|chr3 (180314515-180314723) | |
| 194-445, gnl|rn3|chr4 (69290322-69290530) | |
| 194-445, gnl|tetNig1|chr8 (5826123-5826331) | |
| 194-445, gnl|xenTro1|scaffold_1284 (47110-46904) |