Ss1.1-Ova2-C0003272_A18.5
|
GCGGCTCGAGCCGCCGCCGTCCCCTGTCCCGGCCCCCCCCCTGGGTTCCCTCAGCCCAGC
TCGGTCCAGCCCGGTTCTCGGGAGAATGAAGTTCGTGTACAAAGAGGAGCATCCGTTCGA
GAAGCGCCGCTCTGAGGGCGAGAAAATCCGAAAGAAATACCCAGACCGGGTCCCGGTGAT
AGTGGAAAAAGCTCCCAAAGCTCGGATAGGGGACCTGGACAAAAAGAAATACTTGGTGCC
TTCTGATCTTACAGTTGGTCAATTCTACTTCTTGATCCGGAAGCGAATTCATCTCCGTGC
TGAAGATGCCTTGTTTTTCTTTGTCAACAATGTCATTCCACCCACCAGTGCCACGATGGG
TCAGCTGTACCAGGAACACCATGAAGAAGACTTCTTTCTATACATTGCCTACAGTGATGA
AAGCGTCTACGGTCTGTGAAGTTGCTGTCCCGGAGGTGGGGGTTCCATTCTACAAAGAGA
GGTGGCGCTCCTTCCTTGGCATCCAGTTCCTCCTTCAGGCTCAAACACCATCTCCTTTCT
TCAGGACCTGCACTTAATGTTTGAGGCTGTCTCTCCAGTCCCCTCTGAGCAGAGGGGTAA |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GCGGCTCGAGCCGCCGCCGTCCCCTGTCCCGGCCCCCCCCCTGGGTTCCCTCAGCCCAGC
TCGGTCCAGCCCGGTTCTCGGGAGAATGAAGTTCGTGTACAAAGAGGAGCATCCGTTCGA
GAAGCGCCGCTCTGAGGGCGAGAAAATCCGAAAGAAATACCCAGACCGGGTCCCGGTGAT
AGTGGAAAAAGCTCCCAAAGCTCGGATAGGGGACCTGGACAAAAAGAAATACTTGGTGCC
TTCTGATCTTACAGTTGGTCAATTCTACTTCTTGATCCGGAAGCGAATTCATCTCCGTGC
TGAAGATGCCTTGTTTTTCTTTGTCAACAATGTCATTCCACCCACCAGTGCCACGATGGG
TCAGCTGTACCAGGAACACCATGAAGAAGACTTCTTTCTATACATTGCCTACAGTGATGA
AAGCGTCTACGGTCTGTGAAGTTGCTGTCCCGGAGGTGGGGGTTCCATTCTACAAAGAGA
GGTGGCGCTCCTTCCTTGGCATCCAGTTCCTCCTTCAGGCTCAAACACCATCTCCTTTCT
TCAGGACCTGCACTTAATGTTTGAGGCTGTCTCTCCAGTCCCCTCTGAGCAGAGGGGTAA |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
Human gene identifier and UTR site,
human gene reading direction
|
12-179, gnl|bosTau2|chr19 (20498546-20498381) |
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12-179, gnl|Hg17|chr17 (7086444-7086280) |
|
12-179, gnl|Mm7|chr11 (70073213-70073380) |
| |
|
370-598, gnl|bosTau2|chr19 (20497080-20496851) |
|
370-598, gnl|canFam2|chr5 (35204538-35204893) |
|
370-598, gnl|dasNov1|scaffold_12124 (761-1112) |
|
370-598, gnl|echTel1|scaffold_302513 (452-817) |
|
370-598, gnl|hg17|chr17 (7084530-7084897) |
|
370-598, gnl|Hg17|chr17 (7084966-7084736) |
|
370-598, gnl|loxAfr1|scaffold_43377 (44243-43909) |
|
370-598, gnl|mm7|chr11 (70076454-70076100) |
|
370-598, gnl|Mm7|chr11 (70076029-70076257) |
|
370-598, gnl|monDom2|scaffold_66 (4126073-4126431) |
|
370-598, gnl|oryCun1|scaffold_191535 (11920-12236) |
|
370-598, gnl|panTro1|chr19_random (44668736-44668376) |
|
370-598, gnl|rheMac2|chr16 (6970123-6970489) |
|
370-598, gnl|rn3|chr10 (56854264-56853911) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
12-179, gnl|bosTau2|chr19 (20498546-20498381) |
|
12-179, gnl|Hg17|chr17 (7086444-7086280) |
|
12-179, gnl|Mm7|chr11 (70073213-70073380) |
| |
|
370-598, gnl|bosTau2|chr19 (20497080-20496851) |
|
370-598, gnl|canFam2|chr5 (35204538-35204893) |
|
370-598, gnl|dasNov1|scaffold_12124 (761-1112) |
|
370-598, gnl|echTel1|scaffold_302513 (452-817) |
|
370-598, gnl|hg17|chr17 (7084530-7084897) |
|
370-598, gnl|Hg17|chr17 (7084966-7084736) |
|
370-598, gnl|loxAfr1|scaffold_43377 (44243-43909) |
|
370-598, gnl|mm7|chr11 (70076454-70076100) |
|
370-598, gnl|Mm7|chr11 (70076029-70076257) |
|
370-598, gnl|monDom2|scaffold_66 (4126073-4126431) |
|
370-598, gnl|oryCun1|scaffold_191535 (11920-12236) |
|
370-598, gnl|panTro1|chr19_random (44668736-44668376) |
|
370-598, gnl|rheMac2|chr16 (6970123-6970489) |
|
370-598, gnl|rn3|chr10 (56854264-56853911) |
