Ss1.1-Ova2-C0003272_B20.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCCGATGAAACAAGCAAGAGTGGTAAGCAGTCAATCGCCATTGATGACTGCACCTTTCAC CAGTGTGTGCGACTCAGCAAGTTTGACTCTGAGCGGAGCATCAGCTTTATCCCTCCTGAT GGAGAGTTTGAACTCATGAGATACCGTACTACCAAGGACATCATCCTGCCTTTCCGGGTG ATCCCATTGGTGCGGGAGGTGGGACGCACCAAACTGGAGGTCAAGGTGGTCATCAAGTCC AACTTCAAGCCCTCACTTCTGGCCCAGAAGATTGAGGTAAGGATCCCAACCCCATTGAAC ACAAGCGGGGTGCAAGTGATCTGCATGAAGGGGAAGGCCAAGTACAAGGCCAGCGAGAAC GCCATTGTATGGAAGATCAAGCGCATGGCAGGCATGAAGGAATCACAGATCAGCGCATAG ATTGAGCTCCTGCCCACCAATGATAAGAAGAAATGGGCTCGGCCCCCCATTTCCATGAAC TTTGAGGTGCCATTTGCGCCTTCTGGCCTCAAGGTGCGCTACTTGAAGGTATTTGAGCCG AAGCTGAACTACAGCGACCACGATGTCATCAAATGGGTGCGCTACATTGGCCGAAGTGGC ATTTACGAAACCCGCTGCTAGCTGCCCCGCTGCGGCTGGCCCACATCCTGCCCACCCTTT CCACAGGTCCAAGCACCCCCAGTGACCGCTCACCAGTGTCGTTCCTCCCTCCTGCTCTGC CTCCTTCCCTTCCCAATAGCCCCTGAGTATAGGTCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCCGATGAAACAAGCAAGAGTGGTAAGCAGTCAATCGCCATTGATGACTGCACCTTTCAC CAGTGTGTGCGACTCAGCAAGTTTGACTCTGAGCGGAGCATCAGCTTTATCCCTCCTGAT GGAGAGTTTGAACTCATGAGATACCGTACTACCAAGGACATCATCCTGCCTTTCCGGGTG ATCCCATTGGTGCGGGAGGTGGGACGCACCAAACTGGAGGTCAAGGTGGTCATCAAGTCC AACTTCAAGCCCTCACTTCTGGCCCAGAAGATTGAGGTAAGGATCCCAACCCCATTGAAC ACAAGCGGGGTGCAAGTGATCTGCATGAAGGGGAAGGCCAAGTACAAGGCCAGCGAGAAC GCCATTGTATGGAAGATCAAGCGCATGGCAGGCATGAAGGAATCACAGATCAGCGCATAG ATTGAGCTCCTGCCCACCAATGATAAGAAGAAATGGGCTCGGCCCCCCATTTCCATGAAC TTTGAGGTGCCATTTGCGCCTTCTGGCCTCAAGGTGCGCTACTTGAAGGTATTTGAGCCG AAGCTGAACTACAGCGACCACGATGTCATCAAATGGGTGCGCTACATTGGCCGAAGTGGC ATTTACGAAACCCGCTGCTAGCTGCCCCGCTGCGGCTGGCCCACATCCTGCCCACCCTTT CCACAGGTCCAAGCACCCCCAGTGACCGCTCACCAGTGTCGTTCCTCCCTCCTGCTCTGC CTCCTTCCCTTCCCAATAGCCCCTGAGTATAGGTCT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 275-375, + strand, RNAz p=0.963074 | |
| 564-716, - strand, RNAz p=0.953172 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 275-375, + strand, RNAz p=0.963074 | |
| 564-716, - strand, RNAz p=0.953172 |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 1-207, gnl|bosTau2|chr1 (56177027-56177233) | |
| 1-207, gnl|Hg17|chr3 (185381697-185382468) | |
| 1-207, gnl|Mm7|chr2 (49316153-49316359) | |
| 275-375, gnl|bosTau2|chr1 (51265705-51265605) | |
| 275-375, gnl|canFam2|chr34 (20085939-20086066) | |
| 275-375, gnl|danRer3|chr18 (34974116-34974236) | |
| 275-375, gnl|dasNov1|scaffold_6962 (56098-55973) | |
| 275-375, gnl|echTel1|scaffold_318235 (49195-49066) | |
| 275-375, gnl|fr1|chrUn (74760243-74760110) | |
| 275-375, gnl|galGal2|chr9 (15188489-15188626) | |
| 275-375, gnl|hg17|chr3 (185382627-185382756) | |
| 275-375, gnl|Hg17|chr3 (185382639-185382739) | |
| 275-375, gnl|loxAfr1|scaffold_6504 (46658-46782) | |
| 275-375, gnl|mm7|chr16 (20092204-20092328) | |
| 275-375, gnl|Mm7|chr16 (20092216-20092316) | |
| 275-375, gnl|monDom2|scaffold_167 (1473274-1473392) | |
| 275-375, gnl|oryCun1|scaffold_174838 (83813-83937) | |
| 275-375, gnl|panTro1|chr2 (189333064-189333193) | |
| 275-375, gnl|rheMac2|chr2 (102488141-102488012) | |
| 275-375, gnl|rn3|chr11 (82644719-82644595) | |
| 275-375, gnl|tetNig1|chr15 (4208829-4208946) | |
| 275-375, gnl|xenTro1|scaffold_244 (69722-69874) | |
| 485-756, gnl|bosTau2|chr1 (51264322-51264051) | |
| 485-756, gnl|Hg17|chr3 (185383970-185384244) | |
| 485-756, gnl|Mm7|chr16 (20093330-20093602) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-207, gnl|bosTau2|chr1 (56177027-56177233) | |
| 1-207, gnl|Hg17|chr3 (185381697-185382468) | |
| 1-207, gnl|Mm7|chr2 (49316153-49316359) | |
| 275-375, gnl|bosTau2|chr1 (51265705-51265605) | |
| 275-375, gnl|canFam2|chr34 (20085939-20086066) | |
| 275-375, gnl|danRer3|chr18 (34974116-34974236) | |
| 275-375, gnl|dasNov1|scaffold_6962 (56098-55973) | |
| 275-375, gnl|echTel1|scaffold_318235 (49195-49066) | |
| 275-375, gnl|fr1|chrUn (74760243-74760110) | |
| 275-375, gnl|galGal2|chr9 (15188489-15188626) | |
| 275-375, gnl|hg17|chr3 (185382627-185382756) | |
| 275-375, gnl|Hg17|chr3 (185382639-185382739) | |
| 275-375, gnl|loxAfr1|scaffold_6504 (46658-46782) | |
| 275-375, gnl|mm7|chr16 (20092204-20092328) | |
| 275-375, gnl|Mm7|chr16 (20092216-20092316) | |
| 275-375, gnl|monDom2|scaffold_167 (1473274-1473392) | |
| 275-375, gnl|oryCun1|scaffold_174838 (83813-83937) | |
| 275-375, gnl|panTro1|chr2 (189333064-189333193) | |
| 275-375, gnl|rheMac2|chr2 (102488141-102488012) | |
| 275-375, gnl|rn3|chr11 (82644719-82644595) | |
| 275-375, gnl|tetNig1|chr15 (4208829-4208946) | |
| 275-375, gnl|xenTro1|scaffold_244 (69722-69874) | |
| 485-756, gnl|bosTau2|chr1 (51264322-51264051) | |
| 485-756, gnl|Hg17|chr3 (185383970-185384244) | |
| 485-756, gnl|Mm7|chr16 (20093330-20093602) |