Non-Coding RNA Search

Ss1.1-Ova2-C0003272_C23.5

Sequence:


               
               GCGGCTCGAGTGCTGCTGTGCTGCTGGCCGTGGGTATGCGCGCCGCGCACAGAACCCTAG
CGGCCGCGGGGTCCCGGGGGGCGCAGGTCCGAGGAAATGCAGGTATGTCTGACGGGAGTG
AAGTGGCCAAGGCCCAGAAAGCAGTTCCTGGAGGAGCGGCGCCAACCATCTTCTCCCGGA
TTTTGGACCGGAGCCTCCCAGCTGACATTCTATATGAAGATCAGCAGTGCCTAGTGTTCC
GAGATGTAGCCCCTCAGGCTCCTGTGCACTTCCTGGTCATTCCTAGAAAGCCCATTCCTC
GAATTAGCCAGGCTGAAGAAGACGACCAACAGCTTCTAGGACACTTACCAGTGGCTTGTC
TGGGTGGAGCAGTGGATGAAGCTAGTGGTTTGACTCCTATGGGGAGAGCTACCTCTGCCT
CTGCCCTCTCCCCTTAGCTTCTAGGACACTTACTCCTCGTGGCCAAGAAGATAGCACAGG
CGGAGGGTCTGAAAGATGGGTATCGACTTGTGGTTAACGATGGGAAGATGGGCGCACAAT
CTGTGTACCACCTGCACATTCACGTACTCGGAGGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGGCTCGAGTGCTGCTGTGCTGCTGGCCGTGGGTATGCGCGCCGCGCACAGAACCCTAG
CGGCCGCGGGGTCCCGGGGGGCGCAGGTCCGAGGAAATGCAGGTATGTCTGACGGGAGTG
AAGTGGCCAAGGCCCAGAAAGCAGTTCCTGGAGGAGCGGCGCCAACCATCTTCTCCCGGA
TTTTGGACCGGAGCCTCCCAGCTGACATTCTATATGAAGATCAGCAGTGCCTAGTGTTCC
GAGATGTAGCCCCTCAGGCTCCTGTGCACTTCCTGGTCATTCCTAGAAAGCCCATTCCTC
GAATTAGCCAGGCTGAAGAAGACGACCAACAGCTTCTAGGACACTTACCAGTGGCTTGTC
TGGGTGGAGCAGTGGATGAAGCTAGTGGTTTGACTCCTATGGGGAGAGCTACCTCTGCCT
CTGCCCTCTCCCCTTAGCTTCTAGGACACTTACTCCTCGTGGCCAAGAAGATAGCACAGG
CGGAGGGTCTGAAAGATGGGTATCGACTTGTGGTTAACGATGGGAAGATGGGCGCACAAT
CTGTGTACCACCTGCACATTCACGTACTCGGAGGCC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|62648900|ref|XP_233377.3|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|62648900|ref|XP_233377.3|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               77-333, gnl|bosTau2|chr27 (3472140-3471887)
               

               
               77-333, gnl|Hg17|chr9 (35803784-35803364)
               

               
               77-333, gnl|Mm7|chr4 (43668863-43668428)
               


               
               407-567, gnl|bosTau2|chr27 (3471889-3471731)
               

               
               407-567, gnl|Hg17|chr9 (35803366-35803086)
               

               
               407-567, gnl|Mm7|chr4 (43668430-43668169)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               77-333, gnl|bosTau2|chr27 (3472140-3471887)
               

               
               77-333, gnl|Hg17|chr9 (35803784-35803364)
               

               
               77-333, gnl|Mm7|chr4 (43668863-43668428)
               


               
               407-567, gnl|bosTau2|chr27 (3471889-3471731)
               

               
               407-567, gnl|Hg17|chr9 (35803366-35803086)
               

               
               407-567, gnl|Mm7|chr4 (43668430-43668169)

	77-333, gnl\|bosTau2\|chr27 (3472140-3471887)
	77-333, gnl\|Hg17\|chr9 (35803784-35803364)
	77-333, gnl\|Mm7\|chr4 (43668863-43668428)

	407-567, gnl\|bosTau2\|chr27 (3471889-3471731)
	407-567, gnl\|Hg17\|chr9 (35803366-35803086)
	407-567, gnl\|Mm7\|chr4 (43668430-43668169)