Ss1.1-Ova2-C0003272_K18.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCCAACTCCCCTGCAAGCTCCGGACCAGGAAGTCCATTTCAACTCCCAGCTGATACCCCT CCCCCTGCCTATATGCCACCTGACGATCAGATGGGTCAGGATAACTCCCAGCCTATGGAC ACAAGCAACAACATGATTCCTCAGATCATGCCCAGCATATCTAGCAGAGATGTTCAGCCT GTTGCCTATGAAGAGCCCAAACACTGGTGTTCGATTGTGTACTATGAACTGAACAACCGT GTCGGGGAAGCTTTCCATGCGTCTTCCACCAGTGTGTTAGTAGACGGGTTTACAGACCCT GCCAATAACAAGAGCCGCTTCTGCTTGGGGCTGCTGTCCAACGTTAATCGCAACTCAACC ATCGAGAACACCAGGCGGCACATCGGGAAAGGTGTCCATCTATACTACGTTGGTGGGGAG GTGTATGCCGAGTGTCTTAGTGACAGCAGCATCTTTGTTCAGAGTAGGAACTGCAACTTT CACCATGGCTTCCACCCCACCACCGTCTGTAAGATTCCCAGCAGCTAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCCAACTCCCCTGCAAGCTCCGGACCAGGAAGTCCATTTCAACTCCCAGCTGATACCCCT CCCCCTGCCTATATGCCACCTGACGATCAGATGGGTCAGGATAACTCCCAGCCTATGGAC ACAAGCAACAACATGATTCCTCAGATCATGCCCAGCATATCTAGCAGAGATGTTCAGCCT GTTGCCTATGAAGAGCCCAAACACTGGTGTTCGATTGTGTACTATGAACTGAACAACCGT GTCGGGGAAGCTTTCCATGCGTCTTCCACCAGTGTGTTAGTAGACGGGTTTACAGACCCT GCCAATAACAAGAGCCGCTTCTGCTTGGGGCTGCTGTCCAACGTTAATCGCAACTCAACC ATCGAGAACACCAGGCGGCACATCGGGAAAGGTGTCCATCTATACTACGTTGGTGGGGAG GTGTATGCCGAGTGTCTTAGTGACAGCAGCATCTTTGTTCAGAGTAGGAACTGCAACTTT CACCATGGCTTCCACCCCACCACCGTCTGTAAGATTCCCAGCAGCTAC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 48-169, - strand, RNAz p=0.839924 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 48-169, - strand, RNAz p=0.839924 |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 48-169, gnl|bosTau2|chr7 (31443870-31443749) | |
| 48-169, gnl|canFam2|chr11 (27071821-27071961) | |
| 48-169, gnl|danRer3|chr14 (26077683-26077554) | |
| 48-169, gnl|dasNov1|scaffold_23214 (251-108) | |
| 48-169, gnl|echTel1|scaffold_308600 (99910-100052) | |
| 48-169, gnl|fr1|chrUn (108514215-108514348) | |
| 48-169, gnl|galGal2|chr13 (13980979-13980845) | |
| 48-169, gnl|hg17|chr5 (135526853-135526996) | |
| 48-169, gnl|Hg17|chr5 (135526858-135526979) | |
| 48-169, gnl|loxAfr1|scaffold_8718 (54774-54631) | |
| 48-169, gnl|mm7|chr13 (55820205-55820348) | |
| 48-169, gnl|Mm7|chr13 (55820210-55820331) | |
| 48-169, gnl|monDom2|scaffold_6 (108123012-108122867) | |
| 48-169, gnl|oryCun1|scaffold_201276 (174632-174775) | |
| 48-169, gnl|panTro1|chr4 (142119603-142119746) | |
| 48-169, gnl|rheMac2|chr6 (132627046-132627189) | |
| 48-169, gnl|rn3|chr17 (13820057-13819926) | |
| 48-169, gnl|tetNig1|chrUn_random (35160994-35160870) | |
| 48-169, gnl|xenTro1|scaffold_360 (995627-995495) | |
| 391-528, gnl|bosTau2|chr10 (6325410-6325274) | |
| 391-528, gnl|canFam2|chr30 (34348114-34348267) | |
| 391-528, gnl|danRer3|chr18 (23935512-23935664) | |
| 391-528, gnl|dasNov1|scaffold_87100 (4-152) | |
| 391-528, gnl|echTel1|scaffold_302777 (8257-8410) | |
| 391-528, gnl|fr1|chrUn (67838713-67838561) | |
| 391-528, gnl|galGal2|chr10 (19527683-19527846) | |
| 391-528, gnl|hg17|chr15 (65264110-65264262) | |
| 391-528, gnl|Hg17|chr15 (65264124-65264260) | |
| 391-528, gnl|loxAfr1|scaffold_43028 (8878-8725) | |
| 391-528, gnl|mm7|chr9 (63683304-63683153) | |
| 391-528, gnl|Mm7|chr9 (63683288-63683152) | |
| 391-528, gnl|monDom2|scaffold_12 (45186111-45185962) | |
| 391-528, gnl|oryCun1|scaffold_204411 (6762-6914) | |
| 391-528, gnl|panTro1|chr16_random (18149882-18149731) | |
| 391-528, gnl|rheMac2|chr7 (45755555-45755707) | |
| 391-528, gnl|rn3|chr8 (67847772-67847621) | |
| 391-528, gnl|tetNig1|chr13 (7693449-7693590) | |
| 391-528, gnl|xenTro1|scaffold_5 (37154-37303) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 48-169, gnl|bosTau2|chr7 (31443870-31443749) | |
| 48-169, gnl|canFam2|chr11 (27071821-27071961) | |
| 48-169, gnl|danRer3|chr14 (26077683-26077554) | |
| 48-169, gnl|dasNov1|scaffold_23214 (251-108) | |
| 48-169, gnl|echTel1|scaffold_308600 (99910-100052) | |
| 48-169, gnl|fr1|chrUn (108514215-108514348) | |
| 48-169, gnl|galGal2|chr13 (13980979-13980845) | |
| 48-169, gnl|hg17|chr5 (135526853-135526996) | |
| 48-169, gnl|Hg17|chr5 (135526858-135526979) | |
| 48-169, gnl|loxAfr1|scaffold_8718 (54774-54631) | |
| 48-169, gnl|mm7|chr13 (55820205-55820348) | |
| 48-169, gnl|Mm7|chr13 (55820210-55820331) | |
| 48-169, gnl|monDom2|scaffold_6 (108123012-108122867) | |
| 48-169, gnl|oryCun1|scaffold_201276 (174632-174775) | |
| 48-169, gnl|panTro1|chr4 (142119603-142119746) | |
| 48-169, gnl|rheMac2|chr6 (132627046-132627189) | |
| 48-169, gnl|rn3|chr17 (13820057-13819926) | |
| 48-169, gnl|tetNig1|chrUn_random (35160994-35160870) | |
| 48-169, gnl|xenTro1|scaffold_360 (995627-995495) | |
| 391-528, gnl|bosTau2|chr10 (6325410-6325274) | |
| 391-528, gnl|canFam2|chr30 (34348114-34348267) | |
| 391-528, gnl|danRer3|chr18 (23935512-23935664) | |
| 391-528, gnl|dasNov1|scaffold_87100 (4-152) | |
| 391-528, gnl|echTel1|scaffold_302777 (8257-8410) | |
| 391-528, gnl|fr1|chrUn (67838713-67838561) | |
| 391-528, gnl|galGal2|chr10 (19527683-19527846) | |
| 391-528, gnl|hg17|chr15 (65264110-65264262) | |
| 391-528, gnl|Hg17|chr15 (65264124-65264260) | |
| 391-528, gnl|loxAfr1|scaffold_43028 (8878-8725) | |
| 391-528, gnl|mm7|chr9 (63683304-63683153) | |
| 391-528, gnl|Mm7|chr9 (63683288-63683152) | |
| 391-528, gnl|monDom2|scaffold_12 (45186111-45185962) | |
| 391-528, gnl|oryCun1|scaffold_204411 (6762-6914) | |
| 391-528, gnl|panTro1|chr16_random (18149882-18149731) | |
| 391-528, gnl|rheMac2|chr7 (45755555-45755707) | |
| 391-528, gnl|rn3|chr8 (67847772-67847621) | |
| 391-528, gnl|tetNig1|chr13 (7693449-7693590) | |
| 391-528, gnl|xenTro1|scaffold_5 (37154-37303) |