Non-Coding RNA Search

Ss1.1-Ova2-C0003273_G16.5

Sequence:


               
               TCTCCCTGAGCTGGCAGTTGAATGGGGAGGACCTGACCCACGACATGGAGCTTGTGGAGA
CCAGGCCTGCAGGGGATGGAACCTTCCAGAAGTGGGCATCTGTGGTGGTGCCACTTGTGA
AGGAGCATAATTGGCTCGAGCAGAAGTGGGCATCTGGGCTGCCTGAGCTTGGGAAGGAGC
AGAATTACACATGCCTTGTGGAGCATGAGGGGCTGCCTGAGCCACTTTCCCAGAGATGGG
AGCCTTCTCCATCGACCAACTCCAACATGGAAACCAATGTCATTTATGTCGTCCTTGGAG
CCATCATTGGAACTCTGGCCATCATTGGAATTGTGGTGGCTGTTGTGAGGAAGAGGAGGA
GAAACACAGGTGCCGATGTGTCTCTCCCAGATTGTACAGCATGAAGACAGCTGCCTGGAG
TGGACTGAGTGACAGACGATGTGTTCAGGTCTCTCCTGTGACATCCAGAGTCCTCAGTTC
TCTTTAGACACCAGTGTCTCATGTTCCCTGTGATTCTATGGCTTCAGTGTGAAGAACTGT
GGAGCCCAGCCTGCCCTGCACACCTGGACCCTGTCCCTGCACTGCCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCTCCCTGAGCTGGCAGTTGAATGGGGAGGACCTGACCCACGACATGGAGCTTGTGGAGA
CCAGGCCTGCAGGGGATGGAACCTTCCAGAAGTGGGCATCTGTGGTGGTGCCACTTGTGA
AGGAGCATAATTGGCTCGAGCAGAAGTGGGCATCTGGGCTGCCTGAGCTTGGGAAGGAGC
AGAATTACACATGCCTTGTGGAGCATGAGGGGCTGCCTGAGCCACTTTCCCAGAGATGGG
AGCCTTCTCCATCGACCAACTCCAACATGGAAACCAATGTCATTTATGTCGTCCTTGGAG
CCATCATTGGAACTCTGGCCATCATTGGAATTGTGGTGGCTGTTGTGAGGAAGAGGAGGA
GAAACACAGGTGCCGATGTGTCTCTCCCAGATTGTACAGCATGAAGACAGCTGCCTGGAG
TGGACTGAGTGACAGACGATGTGTTCAGGTCTCTCCTGTGACATCCAGAGTCCTCAGTTC
TCTTTAGACACCAGTGTCTCATGTTCCCTGTGATTCTATGGCTTCAGTGTGAAGAACTGT
GGAGCCCAGCCTGCCCTGCACACCTGGACCCTGTCCCTGCACTGCCTG

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               Q5FVF6_RAT

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q5FVF6_RAT

Aligned organism(s): 15 entry(ies)

More info

Aligned organism(s): 15 entry(ies)

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               1-168, gnl|bosTau2|chr23 (21179026-21178859)
               

               
               1-168, gnl|canFam2|chr12 (3938188-3938396)
               

               
               1-168, gnl|dasNov1|scaffold_10933 (47255-47463)
               

               
               1-168, gnl|echTel1|scaffold_220899 (9485-9277)
               

               
               1-168, gnl|galGal2|chr16_random (560313-560521)
               

               
               1-168, gnl|hg17|chr6 (30337011-30337219)
               

               
               1-168, gnl|Hg17|chr6 (30337050-30337217)
               

               
               1-168, gnl|loxAfr1|scaffold_51273 (9712-9504)
               

               
               1-168, gnl|mm7|chr17 (34433205-34432997)
               

               
               1-168, gnl|Mm7|chr17 (33574014-33574181)
               

               
               1-168, gnl|monDom2|scaffold_40 (21398669-21398877)
               

               
               1-168, gnl|oryCun1|scaffold_171173 (14194-13986)
               

               
               1-168, gnl|panTro1|chr5 (30825353-30825561)
               

               
               1-168, gnl|rheMac2|chr4 (29857208-29857416)
               

               
               1-168, gnl|rn3|chr20 (1864506-1864707)

Aligned organism(s): 15 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-168, gnl|bosTau2|chr23 (21179026-21178859)
               

               
               1-168, gnl|canFam2|chr12 (3938188-3938396)
               

               
               1-168, gnl|dasNov1|scaffold_10933 (47255-47463)
               

               
               1-168, gnl|echTel1|scaffold_220899 (9485-9277)
               

               
               1-168, gnl|galGal2|chr16_random (560313-560521)
               

               
               1-168, gnl|hg17|chr6 (30337011-30337219)
               

               
               1-168, gnl|Hg17|chr6 (30337050-30337217)
               

               
               1-168, gnl|loxAfr1|scaffold_51273 (9712-9504)
               

               
               1-168, gnl|mm7|chr17 (34433205-34432997)
               

               
               1-168, gnl|Mm7|chr17 (33574014-33574181)
               

               
               1-168, gnl|monDom2|scaffold_40 (21398669-21398877)
               

               
               1-168, gnl|oryCun1|scaffold_171173 (14194-13986)
               

               
               1-168, gnl|panTro1|chr5 (30825353-30825561)
               

               
               1-168, gnl|rheMac2|chr4 (29857208-29857416)
               

               
               1-168, gnl|rn3|chr20 (1864506-1864707)

	1-168, gnl\|bosTau2\|chr23 (21179026-21178859)
	1-168, gnl\|canFam2\|chr12 (3938188-3938396)
	1-168, gnl\|dasNov1\|scaffold_10933 (47255-47463)
	1-168, gnl\|echTel1\|scaffold_220899 (9485-9277)
	1-168, gnl\|galGal2\|chr16_random (560313-560521)
	1-168, gnl\|hg17\|chr6 (30337011-30337219)
	1-168, gnl\|Hg17\|chr6 (30337050-30337217)
	1-168, gnl\|loxAfr1\|scaffold_51273 (9712-9504)
	1-168, gnl\|mm7\|chr17 (34433205-34432997)
	1-168, gnl\|Mm7\|chr17 (33574014-33574181)
	1-168, gnl\|monDom2\|scaffold_40 (21398669-21398877)
	1-168, gnl\|oryCun1\|scaffold_171173 (14194-13986)
	1-168, gnl\|panTro1\|chr5 (30825353-30825561)
	1-168, gnl\|rheMac2\|chr4 (29857208-29857416)
	1-168, gnl\|rn3\|chr20 (1864506-1864707)