Ss1.1-Ova2-C0003273_J08.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTGCCAGGCAGGGCACAACTTGCATCTCTGTCTGGCTCATCACCCACCTTTGGTCTGTGC CACTTTGATCCTGCTGCTCCTTGGCCTCTCAGGTCTGGGCCTTGGTGGCTTCCTCCTCAC CCACACAACTGGCCTTCGTAGCCCTGACATTCCCCAGGATTGGGTTACCTTCTTGAGATC TTTTGGCCAGCTAAGTCTGTGCCCCATGAATGAGACAGTCACAGGGAAGTGGCAAGGGCC TCACGTCGTCGGCTTACTGACCACAGGACTCCAGGGACCTGCCTGTATTTTAGTGGTATT CCAAAAATTCTGCCCTCTAGCCAACCACCTATATCCTGCTCAGAAGAGGGAGCTGGAAAT GCTACCCTGAGCCCAATGATGGGTGAGGAGTGTGTCATAGTCTGGAGCCACGAACGCTTT GTGCTCACCAAGCTGCTGACCTCAGAGGAGCTAGCTCTGTGTGGCAGCAGACTGCTGGTC CTGGGCTCTTTCCCTGGTCTGCTCTGTGGTTTTCTCTGCTGTGCCACTGCAGCATGCTTC CATCCACGTCCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTGCCAGGCAGGGCACAACTTGCATCTCTGTCTGGCTCATCACCCACCTTTGGTCTGTGC CACTTTGATCCTGCTGCTCCTTGGCCTCTCAGGTCTGGGCCTTGGTGGCTTCCTCCTCAC CCACACAACTGGCCTTCGTAGCCCTGACATTCCCCAGGATTGGGTTACCTTCTTGAGATC TTTTGGCCAGCTAAGTCTGTGCCCCATGAATGAGACAGTCACAGGGAAGTGGCAAGGGCC TCACGTCGTCGGCTTACTGACCACAGGACTCCAGGGACCTGCCTGTATTTTAGTGGTATT CCAAAAATTCTGCCCTCTAGCCAACCACCTATATCCTGCTCAGAAGAGGGAGCTGGAAAT GCTACCCTGAGCCCAATGATGGGTGAGGAGTGTGTCATAGTCTGGAGCCACGAACGCTTT GTGCTCACCAAGCTGCTGACCTCAGAGGAGCTAGCTCTGTGTGGCAGCAGACTGCTGGTC CTGGGCTCTTTCCCTGGTCTGCTCTGTGGTTTTCTCTGCTGTGCCACTGCAGCATGCTTC CATCCACGTCCC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 1-119, - strand, RNAz p=0.996118 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 1-119, - strand, RNAz p=0.996118 |
| Aligned organism(s): 29 entry(ies) | More info |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
| 1-158, gnl|bosTau2|chr25 (24667263-24667420) | |
| 1-158, gnl|canFam2|chr6 (21013702-21014196) | |
| 1-158, gnl|dasNov1|scaffold_23334 (74581-74079) | |
| 1-158, gnl|echTel1|scaffold_85062 (7929-7415) | |
| 1-158, gnl|hg17|chr16 (29881902-29882412) | |
| 1-158, gnl|Hg17|chr16 (29881974-29882131) | |
| 1-158, gnl|loxAfr1|scaffold_17012 (4446-3943) | |
| 1-158, gnl|mm7|chr7 (122993814-122993308) | |
| 1-158, gnl|Mm7|chr7 (122993740-122993583) | |
| 1-158, gnl|monDom2|scaffold_5 (119779081-119778585) | |
| 1-158, gnl|oryCun1|scaffold_204194 (98309-97809) | |
| 1-158, gnl|panTro1|chr18 (30642891-30643409) | |
| 1-158, gnl|rheMac2|chr20 (27930828-27931346) | |
| 1-158, gnl|rn3|chr1 (186226868-186226340) | |
| 1-158, gnl|xenTro1|scaffold_2065 (44355-44850) | |
| 265-451, gnl|bosTau2|chr25 (25320342-25320529) | |
| 265-451, gnl|canFam2|chr6 (21019654-21019936) | |
| 265-451, gnl|dasNov1|scaffold_101070 (2047-1765) | |
| 265-451, gnl|echTel1|scaffold_178138 (1333-974) | |
| 265-451, gnl|hg17|chr16 (29886809-29887091) | |
| 265-451, gnl|Hg17|chr16 (29886897-29887084) | |
| 265-451, gnl|loxAfr1|scaffold_34517 (19728-19446) | |
| 265-451, gnl|mm7|chr7 (122988428-122988148) | |
| 265-451, gnl|Mm7|chr7 (122988340-122988153) | |
| 265-451, gnl|monDom2|scaffold_5 (119777397-119777104) | |
| 265-451, gnl|oryCun1|scaffold_171640 (1349-1630) | |
| 265-451, gnl|panTro1|chr18 (30647853-30648135) | |
| 265-451, gnl|rheMac2|chr20 (27936357-27936634) | |
| 265-451, gnl|rn3|chr1 (186221133-186220853) |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-158, gnl|bosTau2|chr25 (24667263-24667420) | |
| 1-158, gnl|canFam2|chr6 (21013702-21014196) | |
| 1-158, gnl|dasNov1|scaffold_23334 (74581-74079) | |
| 1-158, gnl|echTel1|scaffold_85062 (7929-7415) | |
| 1-158, gnl|hg17|chr16 (29881902-29882412) | |
| 1-158, gnl|Hg17|chr16 (29881974-29882131) | |
| 1-158, gnl|loxAfr1|scaffold_17012 (4446-3943) | |
| 1-158, gnl|mm7|chr7 (122993814-122993308) | |
| 1-158, gnl|Mm7|chr7 (122993740-122993583) | |
| 1-158, gnl|monDom2|scaffold_5 (119779081-119778585) | |
| 1-158, gnl|oryCun1|scaffold_204194 (98309-97809) | |
| 1-158, gnl|panTro1|chr18 (30642891-30643409) | |
| 1-158, gnl|rheMac2|chr20 (27930828-27931346) | |
| 1-158, gnl|rn3|chr1 (186226868-186226340) | |
| 1-158, gnl|xenTro1|scaffold_2065 (44355-44850) | |
| 265-451, gnl|bosTau2|chr25 (25320342-25320529) | |
| 265-451, gnl|canFam2|chr6 (21019654-21019936) | |
| 265-451, gnl|dasNov1|scaffold_101070 (2047-1765) | |
| 265-451, gnl|echTel1|scaffold_178138 (1333-974) | |
| 265-451, gnl|hg17|chr16 (29886809-29887091) | |
| 265-451, gnl|Hg17|chr16 (29886897-29887084) | |
| 265-451, gnl|loxAfr1|scaffold_34517 (19728-19446) | |
| 265-451, gnl|mm7|chr7 (122988428-122988148) | |
| 265-451, gnl|Mm7|chr7 (122988340-122988153) | |
| 265-451, gnl|monDom2|scaffold_5 (119777397-119777104) | |
| 265-451, gnl|oryCun1|scaffold_171640 (1349-1630) | |
| 265-451, gnl|panTro1|chr18 (30647853-30648135) | |
| 265-451, gnl|rheMac2|chr20 (27936357-27936634) | |
| 265-451, gnl|rn3|chr1 (186221133-186220853) |