Ss1.1-Ova2-C0003274_J10.5
|
CCTCCACTATGCTCCCCACCAGATGAAGGATGTGCCCCTCATCAGCCTGGCCAACATCCT
ACACAATGCCAAGCTCTGGAATGATGCTGTCGTCGTGGCCACCATGGCCGTGGAGATCGC
GCCACACTTCGCTGTGAACCACTTCACTCTGGGCAATGTCTATGTGGCAATGGAAGAATT
TGAGAAGGCCCTGGTGTGGTACGAGTCAACGCTGAAGCTGCAACCAGAGTTTGTACCTGC
CAAGAATCGAATCCAGACAATCCAGTGCCACCTCATGCTGAAGAAGGGCCGGCGCTCTCC
CTAGAGCACTCCTTCCTGTCCCTCAGCTCTCCCAGCCCTCGTGAACAGAGCCCCATCACT
GCTGGTATCCGCATGGATGATGTGTGTGAATTGCCAAGTAAAGTGTAGCAGAGCTCAGCT
GCCAGGGCTTCTAAGTTCTTCCTCATCTCCAGAAGCAGGGTTCCCCAGACACTGTAAATA
CTGAGCCAGGACAACTCGGAGCTCCGCTCCGTCTTCCAAACCTCCATGCCTTCAAGGCTC
CTCTGTGGTCCAGCCTTTTCCCTGGGGAGGCCAGAGCCACACTGCCCATTCTCTGCTTCC
TGTGTAGCCTCTGTTGTCCCTGGAATTGCAATGCCACCTGGGGCCAGTCAGTGAGAAGCA
GGGATTCTCCATGTCCCCACCAGCTCTCCTCTCTGACCCAGTCTCATCCATTCCACGCTG
CTATGTTACAAGCTCTCAGAGATAGTTTGCAGGGGAGGAAGGGGAAACAACTTTACAAAC
AAAATATTTACAACAGCAGAAACTCTTAGGGTCACCTGACCTTTGTAAGTTATTTATGTT
GGGGCGGGAGGGGGGCTGAGCAGGGGAGTCAGCCGTGTGCAACATCTTTATCATTTGTAT
TTTAATTGCCGATCACAAGGAAACCAATACATTCAAGTCCTATATAACAGGTTTATATAT
ATAGAATATGTGTATTTGAAGCCCTCTACAGACCGAGTCTGTATTACTAATTCCTTGTTC
GCTGTGTTTCAT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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CCTCCACTATGCTCCCCACCAGATGAAGGATGTGCCCCTCATCAGCCTGGCCAACATCCT
ACACAATGCCAAGCTCTGGAATGATGCTGTCGTCGTGGCCACCATGGCCGTGGAGATCGC
GCCACACTTCGCTGTGAACCACTTCACTCTGGGCAATGTCTATGTGGCAATGGAAGAATT
TGAGAAGGCCCTGGTGTGGTACGAGTCAACGCTGAAGCTGCAACCAGAGTTTGTACCTGC
CAAGAATCGAATCCAGACAATCCAGTGCCACCTCATGCTGAAGAAGGGCCGGCGCTCTCC
CTAGAGCACTCCTTCCTGTCCCTCAGCTCTCCCAGCCCTCGTGAACAGAGCCCCATCACT
GCTGGTATCCGCATGGATGATGTGTGTGAATTGCCAAGTAAAGTGTAGCAGAGCTCAGCT
GCCAGGGCTTCTAAGTTCTTCCTCATCTCCAGAAGCAGGGTTCCCCAGACACTGTAAATA
CTGAGCCAGGACAACTCGGAGCTCCGCTCCGTCTTCCAAACCTCCATGCCTTCAAGGCTC
CTCTGTGGTCCAGCCTTTTCCCTGGGGAGGCCAGAGCCACACTGCCCATTCTCTGCTTCC
TGTGTAGCCTCTGTTGTCCCTGGAATTGCAATGCCACCTGGGGCCAGTCAGTGAGAAGCA
GGGATTCTCCATGTCCCCACCAGCTCTCCTCTCTGACCCAGTCTCATCCATTCCACGCTG
CTATGTTACAAGCTCTCAGAGATAGTTTGCAGGGGAGGAAGGGGAAACAACTTTACAAAC
AAAATATTTACAACAGCAGAAACTCTTAGGGTCACCTGACCTTTGTAAGTTATTTATGTT
GGGGCGGGAGGGGGGCTGAGCAGGGGAGTCAGCCGTGTGCAACATCTTTATCATTTGTAT
TTTAATTGCCGATCACAAGGAAACCAATACATTCAAGTCCTATATAACAGGTTTATATAT
ATAGAATATGTGTATTTGAAGCCCTCTACAGACCGAGTCTGTATTACTAATTCCTTGTTC
GCTGTGTTTCAT
|
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gi|61811523|ref|XP_606942.1| |
Protein identifier
|
gi|61811523|ref|XP_606942.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
27-173, gnl|bosTau2|chr15 (51625938-51626084) |
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27-173, gnl|canFam2|chr18 (29226016-29225836) |
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27-173, gnl|danRer3|chr11 (29592443-29592606) |
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27-173, gnl|dasNov1|scaffold_73581 (2755-2937) |
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27-173, gnl|echTel1|scaffold_309272 (41242-41059) |
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27-173, gnl|fr1|chrUn (33459572-33459407) |
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27-173, gnl|galGal2|chr5 (18665725-18665544) |
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27-173, gnl|hg17|chr11 (43470114-43470295) |
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27-173, gnl|Hg17|chr11 (43470144-43470290) |
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27-173, gnl|loxAfr1|scaffold_23957 (2843-3025) |
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27-173, gnl|mm7|chr2 (94154425-94154257) |
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27-173, gnl|Mm7|chr2 (94154406-94154260) |
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27-173, gnl|monDom2|scaffold_33 (8814326-8814491) |
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27-173, gnl|oryCun1|scaffold_183761 (36436-36602) |
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27-173, gnl|panTro1|chr9 (43964497-43964678) |
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27-173, gnl|rheMac2|chr14 (28598701-28598520) |
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27-173, gnl|rn3|chr3 (78602758-78602586) |
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27-173, gnl|tetNig1|chr5 (11423261-11423426) |
| |
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473-1028, gnl|bosTau2|chr15 (51628260-51628835) |
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473-1028, gnl|Hg17|chr11 (43472282-43472855) |
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473-1028, gnl|Mm7|chr2 (94152238-94151685) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
27-173, gnl|bosTau2|chr15 (51625938-51626084) |
|
27-173, gnl|canFam2|chr18 (29226016-29225836) |
|
27-173, gnl|danRer3|chr11 (29592443-29592606) |
|
27-173, gnl|dasNov1|scaffold_73581 (2755-2937) |
|
27-173, gnl|echTel1|scaffold_309272 (41242-41059) |
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27-173, gnl|fr1|chrUn (33459572-33459407) |
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27-173, gnl|galGal2|chr5 (18665725-18665544) |
|
27-173, gnl|hg17|chr11 (43470114-43470295) |
|
27-173, gnl|Hg17|chr11 (43470144-43470290) |
|
27-173, gnl|loxAfr1|scaffold_23957 (2843-3025) |
|
27-173, gnl|mm7|chr2 (94154425-94154257) |
|
27-173, gnl|Mm7|chr2 (94154406-94154260) |
|
27-173, gnl|monDom2|scaffold_33 (8814326-8814491) |
|
27-173, gnl|oryCun1|scaffold_183761 (36436-36602) |
|
27-173, gnl|panTro1|chr9 (43964497-43964678) |
|
27-173, gnl|rheMac2|chr14 (28598701-28598520) |
|
27-173, gnl|rn3|chr3 (78602758-78602586) |
|
27-173, gnl|tetNig1|chr5 (11423261-11423426) |
| |
|
473-1028, gnl|bosTau2|chr15 (51628260-51628835) |
|
473-1028, gnl|Hg17|chr11 (43472282-43472855) |
|
473-1028, gnl|Mm7|chr2 (94152238-94151685) |
