Ss1.1-Ova2-C0003274_N10.5
|
GCGGCTCGAGCTCATTGACAAGCTGCTGGTGCTGGACCCTGCACAGCGGATTGACAGTGA
TGATGCCCTCAACCATGACTTCTTCTGGTCGGACCCCATGCCCTCGGACCTCAAGGGCAT
GCTGTCTACTCACTTGACGTCTATGTTTGAGTACCTGGCCCCACCACGACGGAAGGGTAG
CCAGATCACCCAGCAGTCCACCAACCAGAGCCGAAATCCCGCCACTACCAACCAGACGGA
ATTTGAACGTGTCTTCTGAGGCTGTCGCTGGCCGGTGTTCTTAGGTTAGGGGTGGATTGC
TTCTGCTCTGACTTGCATGAACATGTGACATGATGGGACGTTTGAGATTTTCTCCTCCAG
TACATATCAACTCCACCCTGGCGCTGGGAACAGCTGCCTGAGTGGACTGGGGCAGAGCAT
TGGCTGCAAGCCCTGAGGGTCCTGGGGCTGTCCTGCCTGCCTCTCTCTGGAGGTCTCAGC |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GCGGCTCGAGCTCATTGACAAGCTGCTGGTGCTGGACCCTGCACAGCGGATTGACAGTGA
TGATGCCCTCAACCATGACTTCTTCTGGTCGGACCCCATGCCCTCGGACCTCAAGGGCAT
GCTGTCTACTCACTTGACGTCTATGTTTGAGTACCTGGCCCCACCACGACGGAAGGGTAG
CCAGATCACCCAGCAGTCCACCAACCAGAGCCGAAATCCCGCCACTACCAACCAGACGGA
ATTTGAACGTGTCTTCTGAGGCTGTCGCTGGCCGGTGTTCTTAGGTTAGGGGTGGATTGC
TTCTGCTCTGACTTGCATGAACATGTGACATGATGGGACGTTTGAGATTTTCTCCTCCAG
TACATATCAACTCCACCCTGGCGCTGGGAACAGCTGCCTGAGTGGACTGGGGCAGAGCAT
TGGCTGCAAGCCCTGAGGGTCCTGGGGCTGTCCTGCCTGCCTCTCTCTGGAGGTCTCAGC |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
47-180, - strand, RNAmicro p=0.999328 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
47-180, - strand, RNAmicro p=0.999328 |
|
5-433, gnl|bosTau2|chr11 (77316321-77316757) |
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5-433, gnl|canFam2|chr9 (58960564-58960175) |
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5-433, gnl|danRer3|chr21 (1269305-1269676) |
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5-433, gnl|dasNov1|scaffold_117735 (5423-5798) |
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5-433, gnl|echTel1|scaffold_293005 (46165-45784) |
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5-433, gnl|fr1|chrUn (238925866-238926244) |
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5-433, gnl|galGal2|chr17 (5839729-5840101) |
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5-433, gnl|hg17|chr9 (127631006-127631388) |
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5-433, gnl|Hg17|chr9 (127631122-127631550) |
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5-433, gnl|mm7|chr2 (32715607-32715213) |
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5-433, gnl|Mm7|chr2 (32715489-32715075) |
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5-433, gnl|monDom2|scaffold_51 (2196931-2197347) |
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5-433, gnl|oryCun1|scaffold_144509 (17789-17450) |
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5-433, gnl|panTro1|chr11 (112449148-112449530) |
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5-433, gnl|rheMac2|chr15 (98789845-98789463) |
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5-433, gnl|rn3|chr3 (11570117-11569726) |
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5-433, gnl|tetNig1|chrUn_random (139667029-139666661) |
|
5-433, gnl|xenTro1|scaffold_82 (2136252-2135877) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
5-433, gnl|bosTau2|chr11 (77316321-77316757) |
|
5-433, gnl|canFam2|chr9 (58960564-58960175) |
|
5-433, gnl|danRer3|chr21 (1269305-1269676) |
|
5-433, gnl|dasNov1|scaffold_117735 (5423-5798) |
|
5-433, gnl|echTel1|scaffold_293005 (46165-45784) |
|
5-433, gnl|fr1|chrUn (238925866-238926244) |
|
5-433, gnl|galGal2|chr17 (5839729-5840101) |
|
5-433, gnl|hg17|chr9 (127631006-127631388) |
|
5-433, gnl|Hg17|chr9 (127631122-127631550) |
|
5-433, gnl|mm7|chr2 (32715607-32715213) |
|
5-433, gnl|Mm7|chr2 (32715489-32715075) |
|
5-433, gnl|monDom2|scaffold_51 (2196931-2197347) |
|
5-433, gnl|oryCun1|scaffold_144509 (17789-17450) |
|
5-433, gnl|panTro1|chr11 (112449148-112449530) |
|
5-433, gnl|rheMac2|chr15 (98789845-98789463) |
|
5-433, gnl|rn3|chr3 (11570117-11569726) |
|
5-433, gnl|tetNig1|chrUn_random (139667029-139666661) |
|
5-433, gnl|xenTro1|scaffold_82 (2136252-2135877) |
