Ss1.1-Ova2-C0003276_A07.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTCACCTCAACAACAACTTCATGTTCGGGCAGAAGATGAATGTCTGTGTCTCCAAGCAAC CAGCCATTATGCCCGGTCAGTCATATGGGCTAGAAGACGGATCTTGCAGTTACAAAGACT TCAGCGAGTCAAGGAACAATCGGTTCTCTACTCCAGAGCAGGCAGCTAAGAACCGCATCC AGCACCCTAGCAATGTTCTGCACTTCTTCAATGCTCCCCTGGAGGTGACTGAGGAGAACT TCTTTGAGATCTGCGATGAACTGGGAGTGAAGCGGCCAACCTCTGTGAAAGTATTTTCAG GCAAAAGCGAGCGTAGCTCCTCTGGGCTGCTGGAGTGGGACTCCAAGAGTGACGCCCTGG AGACCTTGGGCTTCCTGAACCATTACCAGATGAAAAACCCAAATGGCCCGTATCCATACA CTCTGAAGTTGTGCTTCTCCACCGCACAGCACGCCTCCTAATTAGATGCTGGGAAGGAAG ACTCCATCCGAGCAGGAAGATGTTTCTTTCCTTTATGCTGTTGGTTTCTTTGTTTTGTCT TTATTTTTGCAGTTCTTTTTTTCCATTTAAATGCTAGGTCAGTAGAGGCTTAACCCACAC AATGCTGGAACTCTGGAGGGGGGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTCACCTCAACAACAACTTCATGTTCGGGCAGAAGATGAATGTCTGTGTCTCCAAGCAAC CAGCCATTATGCCCGGTCAGTCATATGGGCTAGAAGACGGATCTTGCAGTTACAAAGACT TCAGCGAGTCAAGGAACAATCGGTTCTCTACTCCAGAGCAGGCAGCTAAGAACCGCATCC AGCACCCTAGCAATGTTCTGCACTTCTTCAATGCTCCCCTGGAGGTGACTGAGGAGAACT TCTTTGAGATCTGCGATGAACTGGGAGTGAAGCGGCCAACCTCTGTGAAAGTATTTTCAG GCAAAAGCGAGCGTAGCTCCTCTGGGCTGCTGGAGTGGGACTCCAAGAGTGACGCCCTGG AGACCTTGGGCTTCCTGAACCATTACCAGATGAAAAACCCAAATGGCCCGTATCCATACA CTCTGAAGTTGTGCTTCTCCACCGCACAGCACGCCTCCTAATTAGATGCTGGGAAGGAAG ACTCCATCCGAGCAGGAAGATGTTTCTTTCCTTTATGCTGTTGGTTTCTTTGTTTTGTCT TTATTTTTGCAGTTCTTTTTTTCCATTTAAATGCTAGGTCAGTAGAGGCTTAACCCACAC AATGCTGGAACTCTGGAGGGGGGG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 439-550, - strand, RNAz p=0.963734 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 439-550, - strand, RNAz p=0.963734 |
| Aligned organism(s): 48 entry(ies) | More info |
| Aligned organism(s): 48 entry(ies) | Help | Less info |
| 46-248, gnl|bosTau2|chr18 (42181522-42181724) | |
| 46-248, gnl|canFam2|chr1 (117187205-117187079) | |
| 46-248, gnl|canFam2|chr1 (117187229-117187079) | |
| 46-248, gnl|canFam2|chr1 (117187205-117187004) | |
| 46-248, gnl|danRer3|chr5 (40868293-40868167) | |
| 46-248, gnl|danRer3|chr5 (40868295-40868167) | |
| 46-248, gnl|danRer3|chr5 (40868293-40868094) | |
| 46-248, gnl|dasNov1|scaffold_50411 (9006-8880) | |
| 46-248, gnl|dasNov1|scaffold_50411 (9030-8880) | |
| 46-248, gnl|dasNov1|scaffold_50411 (9006-8805) | |
| 46-248, gnl|echTel1|scaffold_224764 (5613-5729) | |
| 46-248, gnl|echTel1|scaffold_224764 (5582-5729) | |
| 46-248, gnl|echTel1|scaffold_224764 (5603-5804) | |
| 46-248, gnl|fr1|chrUn (98432188-98432062) | |
| 46-248, gnl|fr1|chrUn (98432211-98432062) | |
| 46-248, gnl|fr1|chrUn (98432188-98431989) | |
| 46-248, gnl|hg17|chr15 (32568705-32568831) | |
| 46-248, gnl|hg17|chr19 (44020854-44021004) | |
| 46-248, gnl|Hg17|chr19 (44021079-44020877) | |
| 46-248, gnl|hg17|chr6 (7426539-7426736) | |
| 46-248, gnl|mm7|chr7 (25754636-25754512) | |
| 46-248, gnl|mm7|chr7 (25754662-25754512) | |
| 46-248, gnl|mm7|chr7 (25754636-25754437) | |
| 46-248, gnl|Mm7|chr7 (25754435-25754637) | |
| 46-248, gnl|monDom2|scaffold_139 (811553-811679) | |
| 46-248, gnl|monDom2|scaffold_139 (811529-811679) | |
| 46-248, gnl|monDom2|scaffold_139 (811553-811754) | |
| 46-248, gnl|oryCun1|scaffold_173353 (47986-47862) | |
| 46-248, gnl|oryCun1|scaffold_173353 (48012-47862) | |
| 46-248, gnl|oryCun1|scaffold_173353 (47986-47787) | |
| 46-248, gnl|panTro1|chr16 (32335794-32335920) | |
| 46-248, gnl|panTro1|chr20 (40954614-40954764) | |
| 46-248, gnl|panTro1|chr5 (7802629-7802826) | |
| 46-248, gnl|rheMac2|chr19 (45176331-45176455) | |
| 46-248, gnl|rheMac2|chr19 (45176305-45176455) | |
| 46-248, gnl|rheMac2|chr4 (7388217-7388400) | |
| 46-248, gnl|rn3|chr1 (84006300-84006150) | |
| 46-248, gnl|rn3|chr3 (1378896-1378769) | |
| 46-248, gnl|rn3|chr3 (1378896-1378697) | |
| 46-248, gnl|tetNig1|chr16 (6816766-6816640) | |
| 46-248, gnl|tetNig1|chr16 (6816772-6816640) | |
| 46-248, gnl|tetNig1|chr16 (6816766-6816567) | |
| 46-248, gnl|xenTro1|scaffold_1700 (35072-35198) | |
| 46-248, gnl|xenTro1|scaffold_1700 (35069-35198) | |
| 46-248, gnl|xenTro1|scaffold_1700 (35077-35273) | |
| 400-622, gnl|bosTau2|chr18 (42183235-42183461) | |
| 400-622, gnl|Hg17|chr19 (44019263-44019018) | |
| 400-622, gnl|Mm7|chr7 (25755736-25755997) |
| Aligned organism(s): 48 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 46-248, gnl|bosTau2|chr18 (42181522-42181724) | |
| 46-248, gnl|canFam2|chr1 (117187205-117187079) | |
| 46-248, gnl|canFam2|chr1 (117187229-117187079) | |
| 46-248, gnl|canFam2|chr1 (117187205-117187004) | |
| 46-248, gnl|danRer3|chr5 (40868293-40868167) | |
| 46-248, gnl|danRer3|chr5 (40868295-40868167) | |
| 46-248, gnl|danRer3|chr5 (40868293-40868094) | |
| 46-248, gnl|dasNov1|scaffold_50411 (9006-8880) | |
| 46-248, gnl|dasNov1|scaffold_50411 (9030-8880) | |
| 46-248, gnl|dasNov1|scaffold_50411 (9006-8805) | |
| 46-248, gnl|echTel1|scaffold_224764 (5613-5729) | |
| 46-248, gnl|echTel1|scaffold_224764 (5582-5729) | |
| 46-248, gnl|echTel1|scaffold_224764 (5603-5804) | |
| 46-248, gnl|fr1|chrUn (98432188-98432062) | |
| 46-248, gnl|fr1|chrUn (98432211-98432062) | |
| 46-248, gnl|fr1|chrUn (98432188-98431989) | |
| 46-248, gnl|hg17|chr15 (32568705-32568831) | |
| 46-248, gnl|hg17|chr19 (44020854-44021004) | |
| 46-248, gnl|Hg17|chr19 (44021079-44020877) | |
| 46-248, gnl|hg17|chr6 (7426539-7426736) | |
| 46-248, gnl|mm7|chr7 (25754636-25754512) | |
| 46-248, gnl|mm7|chr7 (25754662-25754512) | |
| 46-248, gnl|mm7|chr7 (25754636-25754437) | |
| 46-248, gnl|Mm7|chr7 (25754435-25754637) | |
| 46-248, gnl|monDom2|scaffold_139 (811553-811679) | |
| 46-248, gnl|monDom2|scaffold_139 (811529-811679) | |
| 46-248, gnl|monDom2|scaffold_139 (811553-811754) | |
| 46-248, gnl|oryCun1|scaffold_173353 (47986-47862) | |
| 46-248, gnl|oryCun1|scaffold_173353 (48012-47862) | |
| 46-248, gnl|oryCun1|scaffold_173353 (47986-47787) | |
| 46-248, gnl|panTro1|chr16 (32335794-32335920) | |
| 46-248, gnl|panTro1|chr20 (40954614-40954764) | |
| 46-248, gnl|panTro1|chr5 (7802629-7802826) | |
| 46-248, gnl|rheMac2|chr19 (45176331-45176455) | |
| 46-248, gnl|rheMac2|chr19 (45176305-45176455) | |
| 46-248, gnl|rheMac2|chr4 (7388217-7388400) | |
| 46-248, gnl|rn3|chr1 (84006300-84006150) | |
| 46-248, gnl|rn3|chr3 (1378896-1378769) | |
| 46-248, gnl|rn3|chr3 (1378896-1378697) | |
| 46-248, gnl|tetNig1|chr16 (6816766-6816640) | |
| 46-248, gnl|tetNig1|chr16 (6816772-6816640) | |
| 46-248, gnl|tetNig1|chr16 (6816766-6816567) | |
| 46-248, gnl|xenTro1|scaffold_1700 (35072-35198) | |
| 46-248, gnl|xenTro1|scaffold_1700 (35069-35198) | |
| 46-248, gnl|xenTro1|scaffold_1700 (35077-35273) | |
| 400-622, gnl|bosTau2|chr18 (42183235-42183461) | |
| 400-622, gnl|Hg17|chr19 (44019263-44019018) | |
| 400-622, gnl|Mm7|chr7 (25755736-25755997) |