Ss1.1-Ova2-C0003276_C05.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGCTGAGGCCGCTAGGGAGTCCCTCCTGTTGGGACCTGACCTTCCCGCTTGCGGAGCTAT GCTGCCGGCGGCGGCGGCGGCTAGCCGCCTGTGGGGGCCGCGGCTTGGACTCGGGGGATC AGCGCTCCGCCTTGTCAGGCAACAGATGCCCGGTGTCTGTGTGGCGCGGCAATTGAGAAG CAGCAGCCACCGAAGGAGTGAAGCACTCGCCGGTGCACCCCTGGATAATGCTCCCAAGGA GTATCCCCCCAAGATCCAGCAGCTGGTCCAAGACATTGCCAGTCTTACGCTCCTGGAGAT CTCAGACCTCAATGAACTCCTGAAGAAAACATTGAAGATCCAGGATGTCGGCCTTATGCC AATGGGTGGCATGGTGCCTGGTGCCGTCCCTGCTGCAGCACCAGCCCCTGAGGCGGCCGA GGAAGAAGACCTCCCTAAGCAGAAAGAGCAGACACACTTCACGGTGCGCCTGACGGAAGC GAAGCCTGTGGACAAAGTGAAGCTGATCAAGGAGATCAAGAACTACGTTCAGGGCATAAA CCTTGTGCAGGCCAAGAGCTGGTGGAGTCCCTGCCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGCTGAGGCCGCTAGGGAGTCCCTCCTGTTGGGACCTGACCTTCCCGCTTGCGGAGCTAT GCTGCCGGCGGCGGCGGCGGCTAGCCGCCTGTGGGGGCCGCGGCTTGGACTCGGGGGATC AGCGCTCCGCCTTGTCAGGCAACAGATGCCCGGTGTCTGTGTGGCGCGGCAATTGAGAAG CAGCAGCCACCGAAGGAGTGAAGCACTCGCCGGTGCACCCCTGGATAATGCTCCCAAGGA GTATCCCCCCAAGATCCAGCAGCTGGTCCAAGACATTGCCAGTCTTACGCTCCTGGAGAT CTCAGACCTCAATGAACTCCTGAAGAAAACATTGAAGATCCAGGATGTCGGCCTTATGCC AATGGGTGGCATGGTGCCTGGTGCCGTCCCTGCTGCAGCACCAGCCCCTGAGGCGGCCGA GGAAGAAGACCTCCCTAAGCAGAAAGAGCAGACACACTTCACGGTGCGCCTGACGGAAGC GAAGCCTGTGGACAAAGTGAAGCTGATCAAGGAGATCAAGAACTACGTTCAGGGCATAAA CCTTGTGCAGGCCAAGAGCTGGTGGAGTCCCTGCCC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 217-334, - strand, RNAz p=0.668854 | |
| 432-551, - strand, RNAz p=0.925703 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 217-334, - strand, RNAz p=0.668854 | |
| 432-551, - strand, RNAz p=0.925703 |
| Aligned organism(s): 30 entry(ies) | More info |
| Aligned organism(s): 30 entry(ies) | Help | Less info |
| 135-334, gnl|bosTau2|chr19 (45293058-45293257) | |
| 135-334, gnl|canFam2|chr9 (3485656-3485444) | |
| 135-334, gnl|danRer3|chrUn (153042413-153042599) | |
| 135-334, gnl|fr1|chrUn (127533832-127534019) | |
| 135-334, gnl|hg17|chr17 (77281653-77281874) | |
| 135-334, gnl|Hg17|chr17 (77281675-77281882) | |
| 135-334, gnl|loxAfr1|scaffold_98688 (3931-4146) | |
| 135-334, gnl|mm7|chr11 (120594271-120594483) | |
| 135-334, gnl|Mm7|chr11 (120594286-120594491) | |
| 135-334, gnl|monDom2|scaffold_18 (14507419-14507634) | |
| 135-334, gnl|oryCun1|scaffold_76467 (527-316) | |
| 135-334, gnl|panTro1|chr19 (81018019-81018240) | |
| 135-334, gnl|rheMac2|chr16 (77179225-77179446) | |
| 135-334, gnl|rn3|chr10 (109885433-109885644) | |
| 135-334, gnl|tetNig1|chr3 (10842983-10843170) | |
| 415-551, gnl|bosTau2|chr19 (45295503-45295639) | |
| 415-551, gnl|canFam2|chr9 (3483327-3483186) | |
| 415-551, gnl|danRer3|chrUn (153046231-153046373) | |
| 415-551, gnl|fr1|chrUn (127534281-127534430) | |
| 415-551, gnl|galGal2|chr3_random (633842-633976) | |
| 415-551, gnl|hg17|chr17 (77284333-77284478) | |
| 415-551, gnl|Hg17|chr17 (77284340-77284476) | |
| 415-551, gnl|loxAfr1|scaffold_215346 (846-701) | |
| 415-551, gnl|mm7|chr11 (120597134-120597282) | |
| 415-551, gnl|Mm7|chr11 (120597141-120597280) | |
| 415-551, gnl|monDom2|scaffold_18 (14516440-14516585) | |
| 415-551, gnl|panTro1|chr19 (81020693-81020838) | |
| 415-551, gnl|rheMac2|chr16 (77182431-77182576) | |
| 415-551, gnl|rn3|chr10 (109888074-109888221) | |
| 415-551, gnl|tetNig1|chr3 (10843453-10843600) |
| Aligned organism(s): 30 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 135-334, gnl|bosTau2|chr19 (45293058-45293257) | |
| 135-334, gnl|canFam2|chr9 (3485656-3485444) | |
| 135-334, gnl|danRer3|chrUn (153042413-153042599) | |
| 135-334, gnl|fr1|chrUn (127533832-127534019) | |
| 135-334, gnl|hg17|chr17 (77281653-77281874) | |
| 135-334, gnl|Hg17|chr17 (77281675-77281882) | |
| 135-334, gnl|loxAfr1|scaffold_98688 (3931-4146) | |
| 135-334, gnl|mm7|chr11 (120594271-120594483) | |
| 135-334, gnl|Mm7|chr11 (120594286-120594491) | |
| 135-334, gnl|monDom2|scaffold_18 (14507419-14507634) | |
| 135-334, gnl|oryCun1|scaffold_76467 (527-316) | |
| 135-334, gnl|panTro1|chr19 (81018019-81018240) | |
| 135-334, gnl|rheMac2|chr16 (77179225-77179446) | |
| 135-334, gnl|rn3|chr10 (109885433-109885644) | |
| 135-334, gnl|tetNig1|chr3 (10842983-10843170) | |
| 415-551, gnl|bosTau2|chr19 (45295503-45295639) | |
| 415-551, gnl|canFam2|chr9 (3483327-3483186) | |
| 415-551, gnl|danRer3|chrUn (153046231-153046373) | |
| 415-551, gnl|fr1|chrUn (127534281-127534430) | |
| 415-551, gnl|galGal2|chr3_random (633842-633976) | |
| 415-551, gnl|hg17|chr17 (77284333-77284478) | |
| 415-551, gnl|Hg17|chr17 (77284340-77284476) | |
| 415-551, gnl|loxAfr1|scaffold_215346 (846-701) | |
| 415-551, gnl|mm7|chr11 (120597134-120597282) | |
| 415-551, gnl|Mm7|chr11 (120597141-120597280) | |
| 415-551, gnl|monDom2|scaffold_18 (14516440-14516585) | |
| 415-551, gnl|panTro1|chr19 (81020693-81020838) | |
| 415-551, gnl|rheMac2|chr16 (77182431-77182576) | |
| 415-551, gnl|rn3|chr10 (109888074-109888221) | |
| 415-551, gnl|tetNig1|chr3 (10843453-10843600) |