Ss1.1-Ova2-C0003276_K07.5
|
GCGGCTCGAGGAGGGGAGGAGCTTGAAGCCTAAGTCTTAGAGATGGGAGACTTGGGGGGC
AAAGAAAGTGCCATTTTAAACTAAGTAATGTGGCATAGTACCACCAAGTAAATCTAAATA
AGCTTTATGCTGTATCTGAACTAGTTGGCATGTTACTGGGAGGGGGTTGGGGGGATTTTG
GTTATGTGAAATGTTTAATGTTGAAATTGTTGCATGTTGAATTCAAGAAGCAGATCTAAG
GATAAGTATGGGAAGTCACGAAGTAGGTCACGTTCTCGGTCCCCCAAAGAAAATGGAAAA
GGAGATATAAAGTCAAAATCCAGATCCCGGAGCCAGTCTCGATCCCATTCGCCTCTGCCT
GCTCCACCCTCAAAGGCTCGGTCCATGTCCCCTCCGCCAAAAAGAGCTTCAAGGTCCCGT
TCTAGATCTCGTTCCAGGTCCAGATCAAGTTCCAGAGATTAGCCCTGAACTCTACGTTCT
TTGCACACTATGACGGAACTCTTT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GCGGCTCGAGGAGGGGAGGAGCTTGAAGCCTAAGTCTTAGAGATGGGAGACTTGGGGGGC
AAAGAAAGTGCCATTTTAAACTAAGTAATGTGGCATAGTACCACCAAGTAAATCTAAATA
AGCTTTATGCTGTATCTGAACTAGTTGGCATGTTACTGGGAGGGGGTTGGGGGGATTTTG
GTTATGTGAAATGTTTAATGTTGAAATTGTTGCATGTTGAATTCAAGAAGCAGATCTAAG
GATAAGTATGGGAAGTCACGAAGTAGGTCACGTTCTCGGTCCCCCAAAGAAAATGGAAAA
GGAGATATAAAGTCAAAATCCAGATCCCGGAGCCAGTCTCGATCCCATTCGCCTCTGCCT
GCTCCACCCTCAAAGGCTCGGTCCATGTCCCCTCCGCCAAAAAGAGCTTCAAGGTCCCGT
TCTAGATCTCGTTCCAGGTCCAGATCAAGTTCCAGAGATTAGCCCTGAACTCTACGTTCT
TTGCACACTATGACGGAACTCTTT
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
402-517, - strand, RNAmicro p=0.995396 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
402-517, - strand, RNAmicro p=0.995396 |
|
229-504, gnl|bosTau2|chr13 (52821315-52821022) |
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229-504, gnl|canFam2|chr24 (34192026-34192365) |
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229-504, gnl|dasNov1|scaffold_59322 (1236-1582) |
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229-504, gnl|echTel1|scaffold_300247 (3857-4200) |
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229-504, gnl|fr1|chrUn (151779189-151778894) |
|
229-504, gnl|galGal2|chr20 (63672-63336) |
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229-504, gnl|Hg17|chr20 (41522869-41523156) |
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229-504, gnl|hg17|chrX (45529210-45529549) |
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229-504, gnl|loxAfr1|scaffold_5164 (91048-90709) |
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229-504, gnl|mm7|chr2 (162675306-162675630) |
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229-504, gnl|Mm7|chr2 (162675414-162675689) |
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229-504, gnl|monDom2|scaffold_6 (14394519-14394841) |
|
229-504, gnl|oryCun1|scaffold_167191 (6352-6691) |
|
229-504, gnl|panTro1|chrX (47087539-47087879) |
|
229-504, gnl|rheMac2|chrX (43728983-43729323) |
|
229-504, gnl|rn3|chr3 (153704128-153704452) |
|
229-504, gnl|xenTro1|scaffold_35 (110674-110979) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
229-504, gnl|bosTau2|chr13 (52821315-52821022) |
|
229-504, gnl|canFam2|chr24 (34192026-34192365) |
|
229-504, gnl|dasNov1|scaffold_59322 (1236-1582) |
|
229-504, gnl|echTel1|scaffold_300247 (3857-4200) |
|
229-504, gnl|fr1|chrUn (151779189-151778894) |
|
229-504, gnl|galGal2|chr20 (63672-63336) |
|
229-504, gnl|Hg17|chr20 (41522869-41523156) |
|
229-504, gnl|hg17|chrX (45529210-45529549) |
|
229-504, gnl|loxAfr1|scaffold_5164 (91048-90709) |
|
229-504, gnl|mm7|chr2 (162675306-162675630) |
|
229-504, gnl|Mm7|chr2 (162675414-162675689) |
|
229-504, gnl|monDom2|scaffold_6 (14394519-14394841) |
|
229-504, gnl|oryCun1|scaffold_167191 (6352-6691) |
|
229-504, gnl|panTro1|chrX (47087539-47087879) |
|
229-504, gnl|rheMac2|chrX (43728983-43729323) |
|
229-504, gnl|rn3|chr3 (153704128-153704452) |
|
229-504, gnl|xenTro1|scaffold_35 (110674-110979) |
