Non-Coding RNA Search

Ss1.1-Ova2-C0003276_K18.5

Sequence:


               
               GCGGCTCGAGGAAGAACCTGCTTGACAGACATGCTGTGGTCTGCCTGTCCCCAAGCAAAG
TTTGCCTTTAGCACCAGTTCTTCATTCCACACCCCTGCTGTCACCCAGCATGCGCCCCAT
TTTAAAGGTACTGCTGTTGTCAATGGAGAGTTCAAAGAGCTGAGTCTCGACGACTTTAAG
GGGAAATACTTGGTGCTTTTCTTCTACCCTTTGGATTTCACATTTGTGTGTCCTACAGAA
ATTGTTGCTTTCAGTGACAAAGCCAATGAGTTTCATGACGTAAACTGTGAAGTAGTTGCG
GTTTCTGTGGATTCCCACTTCAGTCATCTTGCCTGGATCAACACGCCAAGAAAGAATGGT
GGTTTGGGCCACATGAACATCACGCTGTTGTCGGACTTAACTAAGCAGATATCCCGAGAC
TACGGAGTACTGTTGGAAAGTGCTGGCATTGCGCTCAGAGGTCTCTTCATTATTGACCCT
AATGGTGTCATCAAGCACCTGAGTGTCAATGACCTTCCGGTGGGCCGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGGCTCGAGGAAGAACCTGCTTGACAGACATGCTGTGGTCTGCCTGTCCCCAAGCAAAG
TTTGCCTTTAGCACCAGTTCTTCATTCCACACCCCTGCTGTCACCCAGCATGCGCCCCAT
TTTAAAGGTACTGCTGTTGTCAATGGAGAGTTCAAAGAGCTGAGTCTCGACGACTTTAAG
GGGAAATACTTGGTGCTTTTCTTCTACCCTTTGGATTTCACATTTGTGTGTCCTACAGAA
ATTGTTGCTTTCAGTGACAAAGCCAATGAGTTTCATGACGTAAACTGTGAAGTAGTTGCG
GTTTCTGTGGATTCCCACTTCAGTCATCTTGCCTGGATCAACACGCCAAGAAAGAATGGT
GGTTTGGGCCACATGAACATCACGCTGTTGTCGGACTTAACTAAGCAGATATCCCGAGAC
TACGGAGTACTGTTGGAAAGTGCTGGCATTGCGCTCAGAGGTCTCTTCATTATTGACCCT
AATGGTGTCATCAAGCACCTGAGTGTCAATGACCTTCCGGTGGGCCGA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|38051985|gb|AAH60567.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|38051985|gb|AAH60567.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               106-527, gnl|bosTau2|chr6 (2085881-2085459)
               

               
               106-527, gnl|Hg17|chr9 (12963410-12962990)
               

               
               106-527, gnl|Mm7|chr8 (127853618-127854043)
               


               
               163-526, gnl|bosTau2|chr11 (35830532-35830890)
               

               
               163-526, gnl|Hg17|chr22 (37443743-37443398)
               

               
               163-526, gnl|Mm7|chr4 (26663788-26663436)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               106-527, gnl|bosTau2|chr6 (2085881-2085459)
               

               
               106-527, gnl|Hg17|chr9 (12963410-12962990)
               

               
               106-527, gnl|Mm7|chr8 (127853618-127854043)
               


               
               163-526, gnl|bosTau2|chr11 (35830532-35830890)
               

               
               163-526, gnl|Hg17|chr22 (37443743-37443398)
               

               
               163-526, gnl|Mm7|chr4 (26663788-26663436)

	106-527, gnl\|bosTau2\|chr6 (2085881-2085459)
	106-527, gnl\|Hg17\|chr9 (12963410-12962990)
	106-527, gnl\|Mm7\|chr8 (127853618-127854043)

	163-526, gnl\|bosTau2\|chr11 (35830532-35830890)
	163-526, gnl\|Hg17\|chr22 (37443743-37443398)
	163-526, gnl\|Mm7\|chr4 (26663788-26663436)