Ss1.1-Ova2-C0003276_L04.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCACACTGTGCCCATCTATGAGGGTTACGCGCTCCCTCATGCCATCCTGCGTCTGGACCT GGCTGGCCGGGACCTGACAGACTACCTCATGAAGATCCTGACCGAGCGTGGCTACAGCTT CACCACCACAGCTGAGAGGGAAATCGTGCGTGACATTAAAGAGAAGCTGTGCTATGTTGC CCTAGACTTCGAGCAAGAGATGGCCACTGCCGCATCCTCTTCCTCCCTGGAGAAGAGCTA TGAGCTGCCTGACGGTCAGGTCATCACTATCGGCAATGAGCGGTTCCGATGCCCCGAGGC TCTCTTCCAGCCTTCCTTCCTGGGTATGGAATCCTGTGGCATCCATGAAACTACATTCAA TTCCATCATGAAGTGTGACGTTGACATCCGTAAAGACCTCTATGCCAACACAGTGCTGTC TGGTGGCACCACCATGTACCCAGGCATTGCTGACAGGATGCAGAAGGAGATTACTGCCCT GGCTCCTAGCACCATGAAGATCAAGATCATTGCTCCTCCCTGAGCGCAGTACTCTGTGTG GATTGATGGCTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCACACTGTGCCCATCTATGAGGGTTACGCGCTCCCTCATGCCATCCTGCGTCTGGACCT GGCTGGCCGGGACCTGACAGACTACCTCATGAAGATCCTGACCGAGCGTGGCTACAGCTT CACCACCACAGCTGAGAGGGAAATCGTGCGTGACATTAAAGAGAAGCTGTGCTATGTTGC CCTAGACTTCGAGCAAGAGATGGCCACTGCCGCATCCTCTTCCTCCCTGGAGAAGAGCTA TGAGCTGCCTGACGGTCAGGTCATCACTATCGGCAATGAGCGGTTCCGATGCCCCGAGGC TCTCTTCCAGCCTTCCTTCCTGGGTATGGAATCCTGTGGCATCCATGAAACTACATTCAA TTCCATCATGAAGTGTGACGTTGACATCCGTAAAGACCTCTATGCCAACACAGTGCTGTC TGGTGGCACCACCATGTACCCAGGCATTGCTGACAGGATGCAGAAGGAGATTACTGCCCT GGCTCCTAGCACCATGAAGATCAAGATCATTGCTCCTCCCTGAGCGCAGTACTCTGTGTG GATTGATGGCTC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 129-241, + strand, RNAz p=0.75086 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 129-241, + strand, RNAz p=0.75086 |
| Aligned organism(s): 70 entry(ies) | More info |
| Aligned organism(s): 70 entry(ies) | Help | Less info |
| 1-326, gnl|bosTau2|chr19 (45155123-45154798) | |
| 1-326, gnl|canFam2|chr9 (3626347-3626131) | |
| 1-326, gnl|canFam2|chr9 (3626351-3626149) | |
| 1-326, gnl|canFam2|chr9 (3626351-3626136) | |
| 1-326, gnl|danRer3|chr1 (3327816-3327516) | |
| 1-326, gnl|danRer3|chr21 (25390867-25390611) | |
| 1-326, gnl|danRer3|chr21 (25390916-25390616) | |
| 1-326, gnl|dasNov1|scaffold_46432 (4822-4597) | |
| 1-326, gnl|dasNov1|scaffold_46432 (4826-4615) | |
| 1-326, gnl|dasNov1|scaffold_46432 (4826-4602) | |
| 1-326, gnl|echTel1|scaffold_167184 (10262-10477) | |
| 1-326, gnl|echTel1|scaffold_167184 (10258-10459) | |
| 1-326, gnl|echTel1|scaffold_167184 (10258-10472) | |
| 1-326, gnl|fr1|chrUn (208083682-208083441) | |
| 1-326, gnl|fr1|chrUn (208083732-208083459) | |
| 1-326, gnl|fr1|chrUn (208083732-208083446) | |
| 1-326, gnl|galGal2|chr10 (84538-84322) | |
| 1-326, gnl|galGal2|chr10 (84542-84340) | |
| 1-326, gnl|galGal2|chr10 (84542-84327) | |
| 1-326, gnl|hg17|chr15 (81192437-81192652) | |
| 1-326, gnl|hg17|chr16 (48649882-48650092) | |
| 1-326, gnl|Hg17|chr17 (77093131-77092806) | |
| 1-326, gnl|hg17|chrY (18307340-18307556) | |
| 1-326, gnl|loxAfr1|scaffold_43810 (3926-3710) | |
| 1-326, gnl|loxAfr1|scaffold_43810 (3930-3728) | |
| 1-326, gnl|loxAfr1|scaffold_43810 (3924-3715) | |
| 1-326, gnl|Mm7|chr11 (120456278-120455953) | |
| 1-326, gnl|mm7|chr4 (102940642-102940426) | |
| 1-326, gnl|mm7|chr4 (102940646-102940444) | |
| 1-326, gnl|mm7|chr4 (102940646-102940431) | |
| 1-326, gnl|monDom2|scaffold_18 (19096608-19096824) | |
| 1-326, gnl|monDom2|scaffold_36 (16688877-16688662) | |
| 1-326, gnl|monDom2|scaffold_43 (7199201-7198999) | |
| 1-326, gnl|oryCun1|scaffold_139110 (8798-8583) | |
| 1-326, gnl|oryCun1|scaffold_139110 (8802-8601) | |
| 1-326, gnl|oryCun1|scaffold_139110 (8802-8588) | |
| 1-326, gnl|panTro1|chr16 (81976649-81976864) | |
| 1-326, gnl|panTro1|chrUn_random (12462046-12462245) | |
| 1-326, gnl|panTro1|chrY (19004712-19004929) | |
| 1-326, gnl|rheMac2|chr2 (88303234-88303029) | |
| 1-326, gnl|rheMac2|chr20 (48266804-48267006) | |
| 1-326, gnl|rheMac2|chr7 (63821344-63821128) | |
| 1-326, gnl|rn3|chr18 (24448131-24448347) | |
| 1-326, gnl|rn3|chr18 (24448127-24448329) | |
| 1-326, gnl|rn3|chr3 (71158974-71158759) | |
| 1-326, gnl|tetNig1|chrUn_random (38880094-38880357) | |
| 1-326, gnl|tetNig1|chrUn_random (38880057-38880339) | |
| 1-326, gnl|tetNig1|chrUn_random (38880057-38880352) | |
| 1-326, gnl|xenTro1|scaffold_722 (321134-321350) | |
| 1-326, gnl|xenTro1|scaffold_722 (321132-321332) | |
| 1-326, gnl|xenTro1|scaffold_722 (321132-321345) | |
| 129-325, gnl|bosTau2|chr10 (19085485-19085289) | |
| 129-325, gnl|canFam2|chr30 (5505628-5505833) | |
| 129-325, gnl|danRer3|chr14 (32886032-32885827) | |
| 129-325, gnl|dasNov1|scaffold_1043 (13637-13827) | |
| 129-325, gnl|echTel1|scaffold_318944 (4473-4268) | |
| 129-325, gnl|fr1|chrUn (63305079-63305280) | |
| 129-325, gnl|galGal2|chr5 (29146862-29146670) | |
| 129-325, gnl|hg17|chr15 (32871574-32871779) | |
| 129-325, gnl|Hg17|chr15 (32871777-32871581) | |
| 129-325, gnl|loxAfr1|scaffold_10024 (29791-29599) | |
| 129-325, gnl|mm7|chr2 (113790000-113790205) | |
| 129-325, gnl|Mm7|chr2 (113790203-113790007) | |
| 129-325, gnl|monDom2|scaffold_12 (9573880-9573675) | |
| 129-325, gnl|oryCun1|scaffold_214311 (43778-43970) | |
| 129-325, gnl|panTro1|chr16 (32652195-32652400) | |
| 129-325, gnl|rheMac2|chr7 (13130989-13131194) | |
| 129-325, gnl|rn3|chr3 (99799298-99799503) | |
| 129-325, gnl|tetNig1|chr10 (7897776-7897575) | |
| 129-325, gnl|xenTro1|scaffold_199 (679801-679596) |
| Aligned organism(s): 70 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-326, gnl|bosTau2|chr19 (45155123-45154798) | |
| 1-326, gnl|canFam2|chr9 (3626347-3626131) | |
| 1-326, gnl|canFam2|chr9 (3626351-3626149) | |
| 1-326, gnl|canFam2|chr9 (3626351-3626136) | |
| 1-326, gnl|danRer3|chr1 (3327816-3327516) | |
| 1-326, gnl|danRer3|chr21 (25390867-25390611) | |
| 1-326, gnl|danRer3|chr21 (25390916-25390616) | |
| 1-326, gnl|dasNov1|scaffold_46432 (4822-4597) | |
| 1-326, gnl|dasNov1|scaffold_46432 (4826-4615) | |
| 1-326, gnl|dasNov1|scaffold_46432 (4826-4602) | |
| 1-326, gnl|echTel1|scaffold_167184 (10262-10477) | |
| 1-326, gnl|echTel1|scaffold_167184 (10258-10459) | |
| 1-326, gnl|echTel1|scaffold_167184 (10258-10472) | |
| 1-326, gnl|fr1|chrUn (208083682-208083441) | |
| 1-326, gnl|fr1|chrUn (208083732-208083459) | |
| 1-326, gnl|fr1|chrUn (208083732-208083446) | |
| 1-326, gnl|galGal2|chr10 (84538-84322) | |
| 1-326, gnl|galGal2|chr10 (84542-84340) | |
| 1-326, gnl|galGal2|chr10 (84542-84327) | |
| 1-326, gnl|hg17|chr15 (81192437-81192652) | |
| 1-326, gnl|hg17|chr16 (48649882-48650092) | |
| 1-326, gnl|Hg17|chr17 (77093131-77092806) | |
| 1-326, gnl|hg17|chrY (18307340-18307556) | |
| 1-326, gnl|loxAfr1|scaffold_43810 (3926-3710) | |
| 1-326, gnl|loxAfr1|scaffold_43810 (3930-3728) | |
| 1-326, gnl|loxAfr1|scaffold_43810 (3924-3715) | |
| 1-326, gnl|Mm7|chr11 (120456278-120455953) | |
| 1-326, gnl|mm7|chr4 (102940642-102940426) | |
| 1-326, gnl|mm7|chr4 (102940646-102940444) | |
| 1-326, gnl|mm7|chr4 (102940646-102940431) | |
| 1-326, gnl|monDom2|scaffold_18 (19096608-19096824) | |
| 1-326, gnl|monDom2|scaffold_36 (16688877-16688662) | |
| 1-326, gnl|monDom2|scaffold_43 (7199201-7198999) | |
| 1-326, gnl|oryCun1|scaffold_139110 (8798-8583) | |
| 1-326, gnl|oryCun1|scaffold_139110 (8802-8601) | |
| 1-326, gnl|oryCun1|scaffold_139110 (8802-8588) | |
| 1-326, gnl|panTro1|chr16 (81976649-81976864) | |
| 1-326, gnl|panTro1|chrUn_random (12462046-12462245) | |
| 1-326, gnl|panTro1|chrY (19004712-19004929) | |
| 1-326, gnl|rheMac2|chr2 (88303234-88303029) | |
| 1-326, gnl|rheMac2|chr20 (48266804-48267006) | |
| 1-326, gnl|rheMac2|chr7 (63821344-63821128) | |
| 1-326, gnl|rn3|chr18 (24448131-24448347) | |
| 1-326, gnl|rn3|chr18 (24448127-24448329) | |
| 1-326, gnl|rn3|chr3 (71158974-71158759) | |
| 1-326, gnl|tetNig1|chrUn_random (38880094-38880357) | |
| 1-326, gnl|tetNig1|chrUn_random (38880057-38880339) | |
| 1-326, gnl|tetNig1|chrUn_random (38880057-38880352) | |
| 1-326, gnl|xenTro1|scaffold_722 (321134-321350) | |
| 1-326, gnl|xenTro1|scaffold_722 (321132-321332) | |
| 1-326, gnl|xenTro1|scaffold_722 (321132-321345) | |
| 129-325, gnl|bosTau2|chr10 (19085485-19085289) | |
| 129-325, gnl|canFam2|chr30 (5505628-5505833) | |
| 129-325, gnl|danRer3|chr14 (32886032-32885827) | |
| 129-325, gnl|dasNov1|scaffold_1043 (13637-13827) | |
| 129-325, gnl|echTel1|scaffold_318944 (4473-4268) | |
| 129-325, gnl|fr1|chrUn (63305079-63305280) | |
| 129-325, gnl|galGal2|chr5 (29146862-29146670) | |
| 129-325, gnl|hg17|chr15 (32871574-32871779) | |
| 129-325, gnl|Hg17|chr15 (32871777-32871581) | |
| 129-325, gnl|loxAfr1|scaffold_10024 (29791-29599) | |
| 129-325, gnl|mm7|chr2 (113790000-113790205) | |
| 129-325, gnl|Mm7|chr2 (113790203-113790007) | |
| 129-325, gnl|monDom2|scaffold_12 (9573880-9573675) | |
| 129-325, gnl|oryCun1|scaffold_214311 (43778-43970) | |
| 129-325, gnl|panTro1|chr16 (32652195-32652400) | |
| 129-325, gnl|rheMac2|chr7 (13130989-13131194) | |
| 129-325, gnl|rn3|chr3 (99799298-99799503) | |
| 129-325, gnl|tetNig1|chr10 (7897776-7897575) | |
| 129-325, gnl|xenTro1|scaffold_199 (679801-679596) |