Ss1.1-Ova2-C0003276_O15.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGTTGCCGTGACCGCTCTTGCTGCTGCCGGTGGATGCTGCGCCTCTCGGAGCGCAATATG AAGGTGCTCTTCGCCGCCGCCCTCATCGTGGGCTCCGTTGTCTTCCTTTTGCTGCCTGGA CCCTCCGTGGCCAACGATAAGAAGAAGGGACCTAAAGTCACAGTCAAGGTATACTTTGAT TTCCAAATTGGAGACGAACCTGTAGGACGAGTGACCTTTGGACTCTTTGGAAAGACTGTT CCAAAAACAGTGGATAATTTTGTAGCCTTAGCTACAGGAGAGAAAGGATTTGGCTATAAG AACAGCAAGTTCCATCGTGTCATCAAGGACTTCATGATCCAGGGTGGAGACTTCACCAGG GGAGATGGCACAGGAGGAAAGAGCATCTATGGTGAGCGCTTCCCAGATGAGAACTTCAAG CTGAAGCACTATGGGCCCGGATGGGTGAGCATGGCCAATGCAGGCAAAGACACCAATGGC TCCCAGTTCTTCATAACTACAGTCAAGACCTCCTGGCTAGACGGCAAGCACGTGGTTTTC GGCAAAGTTCTGGAAGGCATGGAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGTTGCCGTGACCGCTCTTGCTGCTGCCGGTGGATGCTGCGCCTCTCGGAGCGCAATATG AAGGTGCTCTTCGCCGCCGCCCTCATCGTGGGCTCCGTTGTCTTCCTTTTGCTGCCTGGA CCCTCCGTGGCCAACGATAAGAAGAAGGGACCTAAAGTCACAGTCAAGGTATACTTTGAT TTCCAAATTGGAGACGAACCTGTAGGACGAGTGACCTTTGGACTCTTTGGAAAGACTGTT CCAAAAACAGTGGATAATTTTGTAGCCTTAGCTACAGGAGAGAAAGGATTTGGCTATAAG AACAGCAAGTTCCATCGTGTCATCAAGGACTTCATGATCCAGGGTGGAGACTTCACCAGG GGAGATGGCACAGGAGGAAAGAGCATCTATGGTGAGCGCTTCCCAGATGAGAACTTCAAG CTGAAGCACTATGGGCCCGGATGGGTGAGCATGGCCAATGCAGGCAAAGACACCAATGGC TCCCAGTTCTTCATAACTACAGTCAAGACCTCCTGGCTAGACGGCAAGCACGTGGTTTTC GGCAAAGTTCTGGAAGGCATGGAT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 328-447, + strand, RNAz p=0.531629 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 328-447, + strand, RNAz p=0.531629 |
| Aligned organism(s): 32 entry(ies) | More info |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
| 169-564, gnl|bosTau2|chr10 (14393054-14393449) | |
| 169-564, gnl|canFam2|chr6 (31028356-31028099) | |
| 169-564, gnl|canFam2|chr9 (47298970-47298706) | |
| 169-564, gnl|danRer3|chr8 (39407053-39406720) | |
| 169-564, gnl|danRer3|chr8 (39407065-39406720) | |
| 169-564, gnl|dasNov1|scaffold_261643 (1089-1346) | |
| 169-564, gnl|dasNov1|scaffold_261643 (1077-1346) | |
| 169-564, gnl|echTel1|scaffold_186705 (6642-6385) | |
| 169-564, gnl|echTel1|scaffold_186705 (6654-6385) | |
| 169-564, gnl|fr1|chrUn (217324180-217324508) | |
| 169-564, gnl|fr1|chrUn (217324168-217324508) | |
| 169-564, gnl|hg17|chr17 (8404626-8404880) | |
| 169-564, gnl|Hg17|chr21 (19151983-19152378) | |
| 169-564, gnl|hg17|chr3 (44889959-44890228) | |
| 169-564, gnl|loxAfr1|scaffold_6995 (1137-885) | |
| 169-564, gnl|loxAfr1|scaffold_6995 (1149-885) | |
| 169-564, gnl|mm7|chr2 (51878821-51878564) | |
| 169-564, gnl|mm7|chr9 (96537399-96537668) | |
| 169-564, gnl|Mm7|chr9 (96537316-96537711) | |
| 169-564, gnl|monDom2|scaffold_312 (77203-76946) | |
| 169-564, gnl|monDom2|scaffold_312 (77215-76946) | |
| 169-564, gnl|oryCun1|scaffold_173019 (891-635) | |
| 169-564, gnl|oryCun1|scaffold_177612 (55478-55747) | |
| 169-564, gnl|panTro1|chr19_random (30048128-30047874) | |
| 169-564, gnl|panTro1|chr2 (46208541-46208810) | |
| 169-564, gnl|rheMac2|chr16 (8333651-8333906) | |
| 169-564, gnl|rheMac2|chr2 (91659048-91658781) | |
| 169-564, gnl|rn3|chr4_random (278172-277915) | |
| 169-564, gnl|rn3|chr4_random (278184-277915) | |
| 169-564, gnl|tetNig1|chrUn_random (755744-755379) | |
| 169-564, gnl|xenTro1|scaffold_143 (1715046-1715303) | |
| 169-564, gnl|xenTro1|scaffold_143 (1715034-1715303) |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 169-564, gnl|bosTau2|chr10 (14393054-14393449) | |
| 169-564, gnl|canFam2|chr6 (31028356-31028099) | |
| 169-564, gnl|canFam2|chr9 (47298970-47298706) | |
| 169-564, gnl|danRer3|chr8 (39407053-39406720) | |
| 169-564, gnl|danRer3|chr8 (39407065-39406720) | |
| 169-564, gnl|dasNov1|scaffold_261643 (1089-1346) | |
| 169-564, gnl|dasNov1|scaffold_261643 (1077-1346) | |
| 169-564, gnl|echTel1|scaffold_186705 (6642-6385) | |
| 169-564, gnl|echTel1|scaffold_186705 (6654-6385) | |
| 169-564, gnl|fr1|chrUn (217324180-217324508) | |
| 169-564, gnl|fr1|chrUn (217324168-217324508) | |
| 169-564, gnl|hg17|chr17 (8404626-8404880) | |
| 169-564, gnl|Hg17|chr21 (19151983-19152378) | |
| 169-564, gnl|hg17|chr3 (44889959-44890228) | |
| 169-564, gnl|loxAfr1|scaffold_6995 (1137-885) | |
| 169-564, gnl|loxAfr1|scaffold_6995 (1149-885) | |
| 169-564, gnl|mm7|chr2 (51878821-51878564) | |
| 169-564, gnl|mm7|chr9 (96537399-96537668) | |
| 169-564, gnl|Mm7|chr9 (96537316-96537711) | |
| 169-564, gnl|monDom2|scaffold_312 (77203-76946) | |
| 169-564, gnl|monDom2|scaffold_312 (77215-76946) | |
| 169-564, gnl|oryCun1|scaffold_173019 (891-635) | |
| 169-564, gnl|oryCun1|scaffold_177612 (55478-55747) | |
| 169-564, gnl|panTro1|chr19_random (30048128-30047874) | |
| 169-564, gnl|panTro1|chr2 (46208541-46208810) | |
| 169-564, gnl|rheMac2|chr16 (8333651-8333906) | |
| 169-564, gnl|rheMac2|chr2 (91659048-91658781) | |
| 169-564, gnl|rn3|chr4_random (278172-277915) | |
| 169-564, gnl|rn3|chr4_random (278184-277915) | |
| 169-564, gnl|tetNig1|chrUn_random (755744-755379) | |
| 169-564, gnl|xenTro1|scaffold_143 (1715046-1715303) | |
| 169-564, gnl|xenTro1|scaffold_143 (1715034-1715303) |