Non-Coding RNA Search

Ss1.1-Ova2-C0003276_P18.5

Sequence:


               
               CGCACGCAGGCGGTGGAGGCTCCGCGGGCCGGGGATTCGGTGGCTCCCGCTGGGGTCGTT
CGGGCTCTGGGGGGCACGAGAAGCTGCCAGTGCACGTGGAGGATGCTCTCACCTACCTCG
ACCAGGTGAAGATCCGCTTTGGCAGTGACCCTGCCACCTACAACGGCTTCCTGGAGATCA
TGAAGGAGTTCAAAAGCCAGAGCATTGACACCCCCGGCGTGATTAGGCGTGTGTCCCAGC
TCTTCCATGAGCACCCTGACCTCATCGTGGGGTTTAATGCTTTCCTTCCGCTTGGATACC
GCATAGACATTCCCAAGAACGGCAAGTTGAACATCCAGTCACCTCTGAGCAACCAGGACA
ACTCTCATAGCCATGGTGACTGTGGGGAGGACTTCAAGCAGATGTCCTACAAGGAGGACA
GAGGCCAGGTGCCCCTGGAGTCCGACTCTGTGGAGTTCAACAATGCTATCAGCTATGTGA
ACAAGATCAAGACCCGCTTTCTGGACCACCCTGAGATCTACAGGTCCTTCCTGGAGATCC
TACACACCTACCAGAAGGAGCAGCTGCACACTAAGGGTCGTCCATTCCGTGGCATGTCTG
AGGAGGAAGTCTTCACAGAGGTGGCCAATCTCTTCCGTGGTCAGGAGGACCTACTGTCAG
AGTTCGGACAGTTCCTGCCTGAGGCAAAGCGGTCCCTGTTTACAGGCAATGGGTCGTGCG
AGATGAACAGCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGCACGCAGGCGGTGGAGGCTCCGCGGGCCGGGGATTCGGTGGCTCCCGCTGGGGTCGTT
CGGGCTCTGGGGGGCACGAGAAGCTGCCAGTGCACGTGGAGGATGCTCTCACCTACCTCG
ACCAGGTGAAGATCCGCTTTGGCAGTGACCCTGCCACCTACAACGGCTTCCTGGAGATCA
TGAAGGAGTTCAAAAGCCAGAGCATTGACACCCCCGGCGTGATTAGGCGTGTGTCCCAGC
TCTTCCATGAGCACCCTGACCTCATCGTGGGGTTTAATGCTTTCCTTCCGCTTGGATACC
GCATAGACATTCCCAAGAACGGCAAGTTGAACATCCAGTCACCTCTGAGCAACCAGGACA
ACTCTCATAGCCATGGTGACTGTGGGGAGGACTTCAAGCAGATGTCCTACAAGGAGGACA
GAGGCCAGGTGCCCCTGGAGTCCGACTCTGTGGAGTTCAACAATGCTATCAGCTATGTGA
ACAAGATCAAGACCCGCTTTCTGGACCACCCTGAGATCTACAGGTCCTTCCTGGAGATCC
TACACACCTACCAGAAGGAGCAGCTGCACACTAAGGGTCGTCCATTCCGTGGCATGTCTG
AGGAGGAAGTCTTCACAGAGGTGGCCAATCTCTTCCGTGGTCAGGAGGACCTACTGTCAG
AGTTCGGACAGTTCCTGCCTGAGGCAAAGCGGTCCCTGTTTACAGGCAATGGGTCGTGCG
AGATGAACAGCG

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|18043296|gb|AAH20049.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|18043296|gb|AAH20049.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               92-202, gnl|bosTau2|chr7 (6087722-6087832)
               

               
               92-202, gnl|Hg17|chr19 (16801598-16801708)
               

               
               92-202, gnl|Mm7|chr8 (71246616-71246726)
               


               
               353-554, gnl|bosTau2|chr7 (6096545-6096749)
               

               
               353-554, gnl|Hg17|chr19 (16813576-16813779)
               

               
               353-554, gnl|Mm7|chr8 (71253657-71253857)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               92-202, gnl|bosTau2|chr7 (6087722-6087832)
               

               
               92-202, gnl|Hg17|chr19 (16801598-16801708)
               

               
               92-202, gnl|Mm7|chr8 (71246616-71246726)
               


               
               353-554, gnl|bosTau2|chr7 (6096545-6096749)
               

               
               353-554, gnl|Hg17|chr19 (16813576-16813779)
               

               
               353-554, gnl|Mm7|chr8 (71253657-71253857)

	92-202, gnl\|bosTau2\|chr7 (6087722-6087832)
	92-202, gnl\|Hg17\|chr19 (16801598-16801708)
	92-202, gnl\|Mm7\|chr8 (71246616-71246726)

	353-554, gnl\|bosTau2\|chr7 (6096545-6096749)
	353-554, gnl\|Hg17\|chr19 (16813576-16813779)
	353-554, gnl\|Mm7\|chr8 (71253657-71253857)