Non-Coding RNA Search

Ss1.1-Ova2-C0003277_K20.5

Sequence:


               
               TGACATTCTGGTTTCTTAACATTTGGACTTTAATGTGGGAGATAAAGGCCTGTTGTTACT
AATGATCAGGGTTTCCCCCTCCCTCTTTGGAGCTGGGGACGGAACCCAGGGCCTTGCACT
TGCTAGGCAACCTCTCTACCACTGAGCTAAATCCCCAATCCCATGATCAGGGTTTAAAGT
CTGGTGCATTCTCAGTCTTGGTTGCATATGGACTAGGGAGTCTAACATCCTTAGAAATAA
AGTAGATGAAGCCAGGCTGGGCTTGAAATGGTGAGAATGCTGCTAAGCCTGATAAGAACA
TCCTCTACTAAGGGAGTCATTTCTAGTGCTCTTGGACGCTGTTTCCACACTGCCTCATCT
TACAGCCCGGCTAGGCTCCGGGTTTAAATGAACCCCCTAGTGGCAGTTTTCCTTGGGGGG
AAGGTACTGGGTGAACCTAGGAATGATGTTCATTCCTTTAAGAAAAATCCAGAGGCTCAG
GTAGGCCTTGAATTTGCGATCTTTATTCACAGCCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGACATTCTGGTTTCTTAACATTTGGACTTTAATGTGGGAGATAAAGGCCTGTTGTTACT
AATGATCAGGGTTTCCCCCTCCCTCTTTGGAGCTGGGGACGGAACCCAGGGCCTTGCACT
TGCTAGGCAACCTCTCTACCACTGAGCTAAATCCCCAATCCCATGATCAGGGTTTAAAGT
CTGGTGCATTCTCAGTCTTGGTTGCATATGGACTAGGGAGTCTAACATCCTTAGAAATAA
AGTAGATGAAGCCAGGCTGGGCTTGAAATGGTGAGAATGCTGCTAAGCCTGATAAGAACA
TCCTCTACTAAGGGAGTCATTTCTAGTGCTCTTGGACGCTGTTTCCACACTGCCTCATCT
TACAGCCCGGCTAGGCTCCGGGTTTAAATGAACCCCCTAGTGGCAGTTTTCCTTGGGGGG
AAGGTACTGGGTGAACCTAGGAATGATGTTCATTCCTTTAAGAAAAATCCAGAGGCTCAG
GTAGGCCTTGAATTTGCGATCTTTATTCACAGCCTC

ncRNA annotation: 1 entry(ies)

Help | Less info


               
               93-158, RF00005;tRNA; (AC120237.5/38384-38457), blast E-value=2e-23

ncRNA annotation: 1 entry(ies)

Help | Less info

PigEST conread start position and end position of sequence/structure similarity to an annotated RNA family,
RNA family (possibly sequence identifier),
blast E-value (sequence sim.) or RaveNnA score (structure sim.)


               
               93-158, RF00005;tRNA; (AC120237.5/38384-38457), blast E-value=2e-23