Ss1.1-OvaF-UMC-pfeto1-013-g05.3
|
CGCATTCATCTCGCCAGCATTCCTCCCCCTGCATGGCCCTGTGGGGAGGCCATGAGATGC
AGCGGAGACCACCATTGGATTTGGAAGCTGAAGGCCTGGGTTTGAGTTCTGGCCACTCCA
TTATTTTAGTGGCTTTGAGGTCTCAGGCAAGTCACATACCTTTCAAAATCTCATCTGTGA
AACCAGGGTAATAATATCTGCCTTTCCTGCTACTTTTCTGGGTTTCTGTGAATGTTGAAA
ATCAAAATACTTTTTTTTTTAAATATTTAATAAAAGTTCTACACATGTAGGCACTCTAAT
TTTTATAGTCAAAGTTAATAGAGTGTGTGTGTGTGTACAGGTATGTGTACACACATATAC
ATATACAAACACTATGCTAAGGAGAAATTTTTAGATTATAACAAATCTATTCCAGGGTAT
ACAAAAATGGATATGAACTGTTTTGGGGGGAAAGAAAATGTTACAGATGTTTCTTGAATA
AATACATCACTT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CGCATTCATCTCGCCAGCATTCCTCCCCCTGCATGGCCCTGTGGGGAGGCCATGAGATGC
AGCGGAGACCACCATTGGATTTGGAAGCTGAAGGCCTGGGTTTGAGTTCTGGCCACTCCA
TTATTTTAGTGGCTTTGAGGTCTCAGGCAAGTCACATACCTTTCAAAATCTCATCTGTGA
AACCAGGGTAATAATATCTGCCTTTCCTGCTACTTTTCTGGGTTTCTGTGAATGTTGAAA
ATCAAAATACTTTTTTTTTTAAATATTTAATAAAAGTTCTACACATGTAGGCACTCTAAT
TTTTATAGTCAAAGTTAATAGAGTGTGTGTGTGTGTACAGGTATGTGTACACACATATAC
ATATACAAACACTATGCTAAGGAGAAATTTTTAGATTATAACAAATCTATTCCAGGGTAT
ACAAAAATGGATATGAACTGTTTTGGGGGGAAAGAAAATGTTACAGATGTTTCTTGAATA
AATACATCACTT
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
337-322, UMC-pd10en2-001-a10 Endometrium gilt D10 of estrous cycle pd10en
(gb|CO986161.1|), blast E-value=0.00000000000004, identity=100% |
PigEST conread start position and end position of sequence similarity to another annotated EST (NCBI dbEST),
transcript identifier and annotation,
blast E-value,
PigEST conread identity to the similar transcript
|
337-322, UMC-pd10en2-001-a10 Endometrium gilt D10 of estrous cycle pd10en
(gb|CO986161.1|), blast E-value=0.00000000000004, identity=100% |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
