Non-Coding RNA Search

Ss1.1-Ovi2-UMC-peov1-008-e06.3

Sequence:


               
               ACTCAAGGAGCTACATCTGCAGCGCTGGGTGGCAGCTGCCTGTCCCCAGGCCCATTTCAT
GCTAAAGGGAGATGATGATGTCTTTGTCCATGTCCCCAATGTCCTAGAATTCCTGGATGG
CTGGGACCCAGCCCAGGACCTCCTAGTGGGAGATGTCATCCGCCAGGCTCCACCCAACAG
GAACACCAACGTCAAATATTTCATCCCTCCTACCATGTATAGGGCCAACTATTACCCACC
CTACGCTGGGGGCGGAGGGTACGTCATGTCCAGAGCCACTGTGCAGCGCCTCCAAGCAGC
TGTGGAAGAGGCCGAACTCTTTCCCATTGATGATGTCTTTGTGGGGATGTGCCTGAGAAA
GCTGGGGGTGAGCCCCACGCACCATGCCGGCTTCAAAACATTTGGAAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACTCAAGGAGCTACATCTGCAGCGCTGGGTGGCAGCTGCCTGTCCCCAGGCCCATTTCAT
GCTAAAGGGAGATGATGATGTCTTTGTCCATGTCCCCAATGTCCTAGAATTCCTGGATGG
CTGGGACCCAGCCCAGGACCTCCTAGTGGGAGATGTCATCCGCCAGGCTCCACCCAACAG
GAACACCAACGTCAAATATTTCATCCCTCCTACCATGTATAGGGCCAACTATTACCCACC
CTACGCTGGGGGCGGAGGGTACGTCATGTCCAGAGCCACTGTGCAGCGCCTCCAAGCAGC
TGTGGAAGAGGCCGAACTCTTTCCCATTGATGATGTCTTTGTGGGGATGTGCCTGAGAAA
GCTGGGGGTGAGCCCCACGCACCATGCCGGCTTCAAAACATTTGGAAT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               80-239, - strand, RNAz p=0.839699

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               80-239, - strand, RNAz p=0.839699

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-408, gnl|bosTau2|chr17 (29087226-29086819)
               

               
               1-408, gnl|Hg17|chr12 (121216260-121216781)
               

               
               1-408, gnl|Mm7|chr5 (122754597-122755118)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-408, gnl|bosTau2|chr17 (29087226-29086819)
               

               
               1-408, gnl|Hg17|chr12 (121216260-121216781)
               

               
               1-408, gnl|Mm7|chr5 (122754597-122755118)

	1-408, gnl\|bosTau2\|chr17 (29087226-29086819)
	1-408, gnl\|Hg17\|chr12 (121216260-121216781)
	1-408, gnl\|Mm7\|chr5 (122754597-122755118)