Ss1.1-Pey1-13H09.5
|
GCACAGCGCATCCTGCAGGCGTGCGGGGGCCACAGCCTGGGGGCCTACAGCATCAGCCCT
GGCATCCAGATGATCCTCGAGGATGTGGCTCGGTACATCGAGCGGCGCGACGGAGGCATT
CCCGCAGACCCCAACAACATCTTCCTGTCCACGGGGGCCAGCGACGCCATCGTGGTAGGC
CGGGGCCAGCTCGGGAAGCCACCGTGGCTCCCAGGGCGTGGCGGAGCGGGGCGGGTGCAG
CCCTCGGCCCCGCCAACCCCGTCCCCTCCCTCCCTCCCCCCACGCGCAGACCGTGCTCAA
GTTGCTAGTGTTCGGCGAGGGTCGCACGCGCACGGGCGTGCTCATCCCCATCCCTCAGTA
TCCACTCTACTCCGCCGCGCTGGCCGAGCTCAACGCCGTGCAGGTGGACTACTACCTGGA
CGAGGAGCGCGCCTGGGCGCTCGACGTGGCCGAGCTGCGGCGCGCGCTGCGCCAGGCGCG
TGACCACTGCCGTCCCCGCGCGCTCTGCGTGATCAACCCCGGCAACCCCACCGGGCAGGT
GCAGACTCGCGAGTGCATCGAGGCCGTGATCCGCTTCGCCTATGAGGAGGGGCTCTTCCT
GCTGGCCGATGAGGTGTATCAAGACAACGTGTACGC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GCACAGCGCATCCTGCAGGCGTGCGGGGGCCACAGCCTGGGGGCCTACAGCATCAGCCCT
GGCATCCAGATGATCCTCGAGGATGTGGCTCGGTACATCGAGCGGCGCGACGGAGGCATT
CCCGCAGACCCCAACAACATCTTCCTGTCCACGGGGGCCAGCGACGCCATCGTGGTAGGC
CGGGGCCAGCTCGGGAAGCCACCGTGGCTCCCAGGGCGTGGCGGAGCGGGGCGGGTGCAG
CCCTCGGCCCCGCCAACCCCGTCCCCTCCCTCCCTCCCCCCACGCGCAGACCGTGCTCAA
GTTGCTAGTGTTCGGCGAGGGTCGCACGCGCACGGGCGTGCTCATCCCCATCCCTCAGTA
TCCACTCTACTCCGCCGCGCTGGCCGAGCTCAACGCCGTGCAGGTGGACTACTACCTGGA
CGAGGAGCGCGCCTGGGCGCTCGACGTGGCCGAGCTGCGGCGCGCGCTGCGCCAGGCGCG
TGACCACTGCCGTCCCCGCGCGCTCTGCGTGATCAACCCCGGCAACCCCACCGGGCAGGT
GCAGACTCGCGAGTGCATCGAGGCCGTGATCCGCTTCGCCTATGAGGAGGGGCTCTTCCT
GCTGGCCGATGAGGTGTATCAAGACAACGTGTACGC
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
414-504, - strand, RNAmicro p=0.987764 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
414-504, - strand, RNAmicro p=0.987764 |
|
40-230, gnl|bosTau2|chr14 (3259685-3259495) |
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40-230, gnl|Hg17|chr8 (145701188-145701402) |
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40-230, gnl|Mm7|chr15 (76780093-76780289) |
| |
|
268-534, gnl|bosTau2|chr14 (3259486-3259218) |
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268-534, gnl|canFam2|chr13 (40955707-40955872) |
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268-534, gnl|danRer3|chr7 (35553799-35553636) |
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268-534, gnl|echTel1|scaffold_161297 (2384-2234) |
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268-534, gnl|fr1|chrUn (283519864-283520027) |
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268-534, gnl|hg17|chr8 (145701417-145701589) |
|
268-534, gnl|Hg17|chr8 (145701411-145701681) |
|
268-534, gnl|loxAfr1|scaffold_46440 (584-749) |
|
268-534, gnl|mm7|chr15 (76780379-76780544) |
|
268-534, gnl|Mm7|chr15 (76780351-76780636) |
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268-534, gnl|monDom2|scaffold_79 (3571578-3571729) |
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268-534, gnl|oryCun1|scaffold_190962 (38524-38361) |
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268-534, gnl|panTro1|chr7 (148957594-148957759) |
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268-534, gnl|rheMac2|chr8 (147170460-147170625) |
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268-534, gnl|rn3|chr7 (114781363-114781528) |
|
268-534, gnl|tetNig1|chr6 (1277894-1277731) |
|
268-534, gnl|xenTro1|scaffold_1265 (167260-167097) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
40-230, gnl|bosTau2|chr14 (3259685-3259495) |
|
40-230, gnl|Hg17|chr8 (145701188-145701402) |
|
40-230, gnl|Mm7|chr15 (76780093-76780289) |
| |
|
268-534, gnl|bosTau2|chr14 (3259486-3259218) |
|
268-534, gnl|canFam2|chr13 (40955707-40955872) |
|
268-534, gnl|danRer3|chr7 (35553799-35553636) |
|
268-534, gnl|echTel1|scaffold_161297 (2384-2234) |
|
268-534, gnl|fr1|chrUn (283519864-283520027) |
|
268-534, gnl|hg17|chr8 (145701417-145701589) |
|
268-534, gnl|Hg17|chr8 (145701411-145701681) |
|
268-534, gnl|loxAfr1|scaffold_46440 (584-749) |
|
268-534, gnl|mm7|chr15 (76780379-76780544) |
|
268-534, gnl|Mm7|chr15 (76780351-76780636) |
|
268-534, gnl|monDom2|scaffold_79 (3571578-3571729) |
|
268-534, gnl|oryCun1|scaffold_190962 (38524-38361) |
|
268-534, gnl|panTro1|chr7 (148957594-148957759) |
|
268-534, gnl|rheMac2|chr8 (147170460-147170625) |
|
268-534, gnl|rn3|chr7 (114781363-114781528) |
|
268-534, gnl|tetNig1|chr6 (1277894-1277731) |
|
268-534, gnl|xenTro1|scaffold_1265 (167260-167097) |
