Ss1.1-Pey1-16C06.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GACCGATATTAGAAATGACACTTATCCCCGAAGCTGAGCTCCGGAAAGCTACCATCCCAA TCTTCTTCGACATGATGCTGTGTGAATATCAAAGGAGTGGGGATTTCAAAAAGTTTGAAA ACGAAATCATCCTCAAGCTGGACCATGAGGTGGAAGGGGGCCGAGGGGACGAGCAGTACA TGCAGCTGCTGGAGTCTATCCTGATGGAGTGTGCCGCAGAACACCCGACTATCTCCAAGT CCGTGGAGAACTTCGTGAACCTGGTCAAAGGCCTCCTGGAGAAGCTGCTGGACTACCGGG GCGTGATGACAGATGAGAGCAAAGACAACCGCATGAGCTGCACTGTAAACCTGCTGAATT TCTACAAAGATAACAATCGGGAAGAGATGTACATAAGATACCTGTACAAACTCCGTGACC TTCACCTAGACTGCGACAATTACACAGAGGCCGCCTATACGCTCCTTCTCCACACCTGGC TCCTCAAGTGGTCAGATGAGCAGTGTGCATCACAGGTCATGCAGACAGGCCAGCAGCACC CCCAGACCCACCGGCAGCTGAAGGAGACGCTCTATGAGATCATCATAGGCTACTTTGACA AAGGAAAGATGTGGGAAGAGGCCATCAGTCTGTGCAAGGAGCTGGCGGAACAGTATGAGA TGGAAATCTTTGACTACGAGCTGCTGAGCCAGAACCTGATCCAGCAGGCAAAATTCTATG AAAGCATCATGAAAATCCTCAGACCCAAGCCGGACTACTTTGCTGTCG------------ AGGGCTTCCCCT------------ACAAAGTGTTCATCTACCGAGGGAAGGAGTATGAGC GAAGAGAAGATT------------------------NCCCCAACGCAGAGAAGATGAACA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GACCGATATTAGAAATGACACTTATCCCCGAAGCTGAGCTCCGGAAAGCTACCATCCCAA TCTTCTTCGACATGATGCTGTGTGAATATCAAAGGAGTGGGGATTTCAAAAAGTTTGAAA ACGAAATCATCCTCAAGCTGGACCATGAGGTGGAAGGGGGCCGAGGGGACGAGCAGTACA TGCAGCTGCTGGAGTCTATCCTGATGGAGTGTGCCGCAGAACACCCGACTATCTCCAAGT CCGTGGAGAACTTCGTGAACCTGGTCAAAGGCCTCCTGGAGAAGCTGCTGGACTACCGGG GCGTGATGACAGATGAGAGCAAAGACAACCGCATGAGCTGCACTGTAAACCTGCTGAATT TCTACAAAGATAACAATCGGGAAGAGATGTACATAAGATACCTGTACAAACTCCGTGACC TTCACCTAGACTGCGACAATTACACAGAGGCCGCCTATACGCTCCTTCTCCACACCTGGC TCCTCAAGTGGTCAGATGAGCAGTGTGCATCACAGGTCATGCAGACAGGCCAGCAGCACC CCCAGACCCACCGGCAGCTGAAGGAGACGCTCTATGAGATCATCATAGGCTACTTTGACA AAGGAAAGATGTGGGAAGAGGCCATCAGTCTGTGCAAGGAGCTGGCGGAACAGTATGAGA TGGAAATCTTTGACTACGAGCTGCTGAGCCAGAACCTGATCCAGCAGGCAAAATTCTATG AAAGCATCATGAAAATCCTCAGACCCAAGCCGGACTACTTTGCTGTCG------------ AGGGCTTCCCCT------------ACAAAGTGTTCATCTACCGAGGGAAGGAGTATGAGC GAAGAGAAGATT------------------------NCCCCAACGCAGAGAAGATGAACA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
| 1-124, gnl|bosTau2|chr20 (1862610-1862733) | |
| 1-124, gnl|Hg17|chr5 (169378578-169378701) | |
| 1-124, gnl|Mm7|chr11 (34234743-34234619) | |
| 200-356, gnl|bosTau2|chr20 (1880005-1880161) | |
| 200-356, gnl|canFam2|chr4 (45018983-45018815) | |
| 200-356, gnl|danRer3|chr8 (299513-299670) | |
| 200-356, gnl|echTel1|scaffold_305911 (121043-121212) | |
| 200-356, gnl|fr1|chrUn (144754583-144754418) | |
| 200-356, gnl|galGal2|chr13 (5561742-5561908) | |
| 200-356, gnl|hg17|chr5 (169393976-169394144) | |
| 200-356, gnl|Hg17|chr5 (169393981-169394137) | |
| 200-356, gnl|loxAfr1|scaffold_8101 (46520-46689) | |
| 200-356, gnl|mm7|chr11 (34220122-34219953) | |
| 200-356, gnl|Mm7|chr11 (34220114-34219958) | |
| 200-356, gnl|monDom2|scaffold_6 (31526161-31525992) | |
| 200-356, gnl|oryCun1|scaffold_214654 (432872-433041) | |
| 200-356, gnl|panTro1|chr4 (176643245-176643413) | |
| 200-356, gnl|rheMac2|chr6 (166421894-166422062) | |
| 200-356, gnl|rn3|chr10 (19248731-19248562) | |
| 200-356, gnl|tetNig1|chr2_random (2040839-2041003) | |
| 487-608, gnl|bosTau2|chr20 (1887336-1887457) | |
| 487-608, gnl|canFam2|chr4 (45012779-45012622) | |
| 487-608, gnl|danRer3|chrUn (126671789-126671659) | |
| 487-608, gnl|dasNov1|scaffold_12666 (9250-9096) | |
| 487-608, gnl|echTel1|scaffold_305911 (128933-129082) | |
| 487-608, gnl|fr1|chrUn (144750597-144750460) | |
| 487-608, gnl|galGal2|chr13 (5566389-5566550) | |
| 487-608, gnl|hg17|chr5 (169401578-169401731) | |
| 487-608, gnl|Hg17|chr5 (169401593-169401714) | |
| 487-608, gnl|loxAfr1|scaffold_8101 (53238-53394) | |
| 487-608, gnl|mm7|chr11 (34213579-34213425) | |
| 487-608, gnl|Mm7|chr11 (34213564-34213443) | |
| 487-608, gnl|monDom2|scaffold_6 (31518229-31518059) | |
| 487-608, gnl|oryCun1|scaffold_214654 (440109-440266) | |
| 487-608, gnl|panTro1|chr4 (176650849-176651002) | |
| 487-608, gnl|rheMac2|chr6 (166429676-166429832) | |
| 487-608, gnl|rn3|chr10 (19241985-19241831) | |
| 487-608, gnl|tetNig1|chr2_random (2043549-2043684) | |
| 487-608, gnl|xenTro1|scaffold_307 (349165-349301) |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-124, gnl|bosTau2|chr20 (1862610-1862733) | |
| 1-124, gnl|Hg17|chr5 (169378578-169378701) | |
| 1-124, gnl|Mm7|chr11 (34234743-34234619) | |
| 200-356, gnl|bosTau2|chr20 (1880005-1880161) | |
| 200-356, gnl|canFam2|chr4 (45018983-45018815) | |
| 200-356, gnl|danRer3|chr8 (299513-299670) | |
| 200-356, gnl|echTel1|scaffold_305911 (121043-121212) | |
| 200-356, gnl|fr1|chrUn (144754583-144754418) | |
| 200-356, gnl|galGal2|chr13 (5561742-5561908) | |
| 200-356, gnl|hg17|chr5 (169393976-169394144) | |
| 200-356, gnl|Hg17|chr5 (169393981-169394137) | |
| 200-356, gnl|loxAfr1|scaffold_8101 (46520-46689) | |
| 200-356, gnl|mm7|chr11 (34220122-34219953) | |
| 200-356, gnl|Mm7|chr11 (34220114-34219958) | |
| 200-356, gnl|monDom2|scaffold_6 (31526161-31525992) | |
| 200-356, gnl|oryCun1|scaffold_214654 (432872-433041) | |
| 200-356, gnl|panTro1|chr4 (176643245-176643413) | |
| 200-356, gnl|rheMac2|chr6 (166421894-166422062) | |
| 200-356, gnl|rn3|chr10 (19248731-19248562) | |
| 200-356, gnl|tetNig1|chr2_random (2040839-2041003) | |
| 487-608, gnl|bosTau2|chr20 (1887336-1887457) | |
| 487-608, gnl|canFam2|chr4 (45012779-45012622) | |
| 487-608, gnl|danRer3|chrUn (126671789-126671659) | |
| 487-608, gnl|dasNov1|scaffold_12666 (9250-9096) | |
| 487-608, gnl|echTel1|scaffold_305911 (128933-129082) | |
| 487-608, gnl|fr1|chrUn (144750597-144750460) | |
| 487-608, gnl|galGal2|chr13 (5566389-5566550) | |
| 487-608, gnl|hg17|chr5 (169401578-169401731) | |
| 487-608, gnl|Hg17|chr5 (169401593-169401714) | |
| 487-608, gnl|loxAfr1|scaffold_8101 (53238-53394) | |
| 487-608, gnl|mm7|chr11 (34213579-34213425) | |
| 487-608, gnl|Mm7|chr11 (34213564-34213443) | |
| 487-608, gnl|monDom2|scaffold_6 (31518229-31518059) | |
| 487-608, gnl|oryCun1|scaffold_214654 (440109-440266) | |
| 487-608, gnl|panTro1|chr4 (176650849-176651002) | |
| 487-608, gnl|rheMac2|chr6 (166429676-166429832) | |
| 487-608, gnl|rn3|chr10 (19241985-19241831) | |
| 487-608, gnl|tetNig1|chr2_random (2043549-2043684) | |
| 487-608, gnl|xenTro1|scaffold_307 (349165-349301) |