Non-Coding RNA Search

Ss1.1-Pey1-17C06.5

Sequence:


               
               ATTTAAATTGTGTTCTCTATGTTCCAAGACTTGGCTCTCTTTTATATGTTTAAAAAAGTA
AAGTTCTACCAAGATATTTAATTCACACAAAGAGGGCTGCTGATCCATGCTATACAGATG
GGAGGCAACCAAAGTTTTTCTCCCTTGCCAATGGAATAGGGAAATTAACAAAATTCAGGC
AGATTTATAGCTCAGAATGTTCACTCTTCTCCAGCCTGAGGAAATCCCAGGTGGAAAAGT
AGGATGTGGAACCTACTGGCTAAACTCTCGGTGGACAGAACTCTGGAGCTTTTAAAAGGA
CTGAAAGTTCATCTCTCTAACAGTTTCATTTTGTAAATGGGGAAATCATGGACCAGAGAT
GTTTGGCTTGCCAAGGAGGATGTGAGCTACATTATGGTGGTTTTAGTTCCTAACCTAGCT
AGAATGCCAAGTAGATTTTCCAGTGCGAGCCTCCTTTTGGGGAAGGGCCACGTCATTCTT
TAATATGAACCAAGGCATACTCTTTGATTACCACTATCCCACTCGCCTCTCCCCACTCCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTTAAATTGTGTTCTCTATGTTCCAAGACTTGGCTCTCTTTTATATGTTTAAAAAAGTA
AAGTTCTACCAAGATATTTAATTCACACAAAGAGGGCTGCTGATCCATGCTATACAGATG
GGAGGCAACCAAAGTTTTTCTCCCTTGCCAATGGAATAGGGAAATTAACAAAATTCAGGC
AGATTTATAGCTCAGAATGTTCACTCTTCTCCAGCCTGAGGAAATCCCAGGTGGAAAAGT
AGGATGTGGAACCTACTGGCTAAACTCTCGGTGGACAGAACTCTGGAGCTTTTAAAAGGA
CTGAAAGTTCATCTCTCTAACAGTTTCATTTTGTAAATGGGGAAATCATGGACCAGAGAT
GTTTGGCTTGCCAAGGAGGATGTGAGCTACATTATGGTGGTTTTAGTTCCTAACCTAGCT
AGAATGCCAAGTAGATTTTCCAGTGCGAGCCTCCTTTTGGGGAAGGGCCACGTCATTCTT
TAATATGAACCAAGGCATACTCTTTGATTACCACTATCCCACTCGCCTCTCCCCACTCCA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               158-313, + strand, RNAz p=0.991787

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               158-313, + strand, RNAz p=0.991787

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-482, gnl|bosTau2|chr10 (62491321-62490827)
               

               
               1-482, gnl|Hg17|chr14 (78019603-78020051)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-482, gnl|bosTau2|chr10 (62491321-62490827)
               

               
               1-482, gnl|Hg17|chr14 (78019603-78020051)

	1-482, gnl\|bosTau2\|chr10 (62491321-62490827)
	1-482, gnl\|Hg17\|chr14 (78019603-78020051)