Ss1.1-Pey1-22F02.5
|
GTGACGTGGCCGGAGCAGCCCTGTCTGTGCCTAAACTGAAGCTCGGCCACGCTAGATCTG
GATTGGTGGTAGGCGGGGCGGGCCCCGGTCGCTGGCCGGAAGCGGAAGTGGAGGAAAGAT
GCAGGACCATCAGCACGTGCCCATCGACATCCAGACCAGCAAGCTGCTCGACTGGCTGGT
GGACAGAAGGCACTGCAACCTGAAATGGCAGAGTCAGGTGTTGACCATCCGAGAGAAGAT
CAACGCTGCCATCCAGGACATGCCAGAGAGCGAAGAGATCGCCCAGCTGCTCTCTGGATC
CTGTGAGCGCTTTGGGGCTACGTTCCTGGACCCCCCCCTCTTTCCCAGGGTGGCATGTGT
CTGTTGAGTTGCTCCCTTTTGCTGAGCCATAGGGCTGAGCCCTAAAGAAAAGGAGAGTTT
TGTTTGGGGTACAGATGCTGGTTCCTCCCCACACGAAATGATGAAGGGGAGCGCTACGCC
CGCTAACGTTCCTGGCACATACAG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GTGACGTGGCCGGAGCAGCCCTGTCTGTGCCTAAACTGAAGCTCGGCCACGCTAGATCTG
GATTGGTGGTAGGCGGGGCGGGCCCCGGTCGCTGGCCGGAAGCGGAAGTGGAGGAAAGAT
GCAGGACCATCAGCACGTGCCCATCGACATCCAGACCAGCAAGCTGCTCGACTGGCTGGT
GGACAGAAGGCACTGCAACCTGAAATGGCAGAGTCAGGTGTTGACCATCCGAGAGAAGAT
CAACGCTGCCATCCAGGACATGCCAGAGAGCGAAGAGATCGCCCAGCTGCTCTCTGGATC
CTGTGAGCGCTTTGGGGCTACGTTCCTGGACCCCCCCCTCTTTCCCAGGGTGGCATGTGT
CTGTTGAGTTGCTCCCTTTTGCTGAGCCATAGGGCTGAGCCCTAAAGAAAAGGAGAGTTT
TGTTTGGGGTACAGATGCTGGTTCCTCCCCACACGAAATGATGAAGGGGAGCGCTACGCC
CGCTAACGTTCCTGGCACATACAG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
183-278, - strand, RNAmicro p=0.979917 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
183-278, - strand, RNAmicro p=0.979917 |
|
1-125, gnl|bosTau2|chr19 (31167388-31167264) |
|
1-125, gnl|canFam2|chr9 (27603746-27604115) |
|
1-125, gnl|dasNov1|scaffold_84178 (42736-42361) |
|
1-125, gnl|hg17|chr17 (43403195-43403555) |
|
1-125, gnl|Hg17|chr17 (43403393-43403518) |
|
1-125, gnl|mm7|chr11 (97025745-97025394) |
|
1-125, gnl|Mm7|chr11 (97025542-97025422) |
|
1-125, gnl|monDom2|scaffold_18 (46506246-46505848) |
|
1-125, gnl|oryCun1|scaffold_206539 (50147-49784) |
|
1-125, gnl|panTro1|chr19_random (42338878-42339238) |
|
1-125, gnl|rheMac2|chr16 (32185480-32185840) |
| |
|
170-503, gnl|bosTau2|chr19 (31165302-31164971) |
|
170-503, gnl|Hg17|chr17 (43405883-43406218) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-125, gnl|bosTau2|chr19 (31167388-31167264) |
|
1-125, gnl|canFam2|chr9 (27603746-27604115) |
|
1-125, gnl|dasNov1|scaffold_84178 (42736-42361) |
|
1-125, gnl|hg17|chr17 (43403195-43403555) |
|
1-125, gnl|Hg17|chr17 (43403393-43403518) |
|
1-125, gnl|mm7|chr11 (97025745-97025394) |
|
1-125, gnl|Mm7|chr11 (97025542-97025422) |
|
1-125, gnl|monDom2|scaffold_18 (46506246-46505848) |
|
1-125, gnl|oryCun1|scaffold_206539 (50147-49784) |
|
1-125, gnl|panTro1|chr19_random (42338878-42339238) |
|
1-125, gnl|rheMac2|chr16 (32185480-32185840) |
| |
|
170-503, gnl|bosTau2|chr19 (31165302-31164971) |
|
170-503, gnl|Hg17|chr17 (43405883-43406218) |
