Ss1.1-Pey1-28B02.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTTCTCAGCAATATTAGATTCAGCGAGTTCTTATCCTCTCATTATCTGTGAGGACTGAAT TCAGCCCCCAACTTTGGGCGCAGGCTATTTTATCGGGGAAAGTCAAAACCTCCCCAAGAG GATCAAAGGGCTCAGCCACTGAGCCGTAGGAAAGCGAGGGCGATGCGTCAGATTATAAAG CGGCTCCTCAGCTCTTTTTATTCCTCACTTCAGCTGTTCAGATTTTAAAGAGAGGGTTAG GAGGACCAGAAGGGACTCAAGGGATGGAGGCAAAAGGTTCCATCCTTAATCCAAGCCAGA GACAAAGCCGCGCCGGGCAGCCCGCGGCGCGTGGCCCCCACACTCCGGCCCGAGATGAAT GCTGCGGCAGAAGCCGAATTCAACATCCTCCTGGCCACCGACTCGTACAAGAACTGAAGA AAGGATCATTGGCTGTCTAGGCACCAAGAATGGTGTTTTGCAAATAGGTGGAATAGTGTC CAAGCACATGACTACATGTTGGGATTTCGTTTTCACCTGTATCCTTTCCAGAAGGTTTAG GACAATTTGAACCAAAATATATATTCATTTCTGTAATTTCATACTTTATTATGCATTTTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTTCTCAGCAATATTAGATTCAGCGAGTTCTTATCCTCTCATTATCTGTGAGGACTGAAT TCAGCCCCCAACTTTGGGCGCAGGCTATTTTATCGGGGAAAGTCAAAACCTCCCCAAGAG GATCAAAGGGCTCAGCCACTGAGCCGTAGGAAAGCGAGGGCGATGCGTCAGATTATAAAG CGGCTCCTCAGCTCTTTTTATTCCTCACTTCAGCTGTTCAGATTTTAAAGAGAGGGTTAG GAGGACCAGAAGGGACTCAAGGGATGGAGGCAAAAGGTTCCATCCTTAATCCAAGCCAGA GACAAAGCCGCGCCGGGCAGCCCGCGGCGCGTGGCCCCCACACTCCGGCCCGAGATGAAT GCTGCGGCAGAAGCCGAATTCAACATCCTCCTGGCCACCGACTCGTACAAGAACTGAAGA AAGGATCATTGGCTGTCTAGGCACCAAGAATGGTGTTTTGCAAATAGGTGGAATAGTGTC CAAGCACATGACTACATGTTGGGATTTCGTTTTCACCTGTATCCTTTCCAGAAGGTTTAG GACAATTTGAACCAAAATATATATTCATTTCTGTAATTTCATACTTTATTATGCATTTTG |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 189-307, + strand, RNAz p=0.679627 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 189-307, + strand, RNAz p=0.679627 |
| Aligned organism(s): 24 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
| 1-307, gnl|bosTau2|chr4 (23458216-23458513) | |
| 1-307, gnl|dasNov1|scaffold_5079 (65980-65740) | |
| 1-307, gnl|echTel1|scaffold_290018 (41421-41198) | |
| 1-307, gnl|hg17|chr7 (105519932-105520175) | |
| 1-307, gnl|Hg17|chr7 (105520245-105519938) | |
| 1-307, gnl|loxAfr1|scaffold_220992 (419-641) | |
| 1-307, gnl|mm7|chr12 (30659545-30659341) | |
| 1-307, gnl|Mm7|chr12 (30659254-30659537) | |
| 1-307, gnl|oryCun1|scaffold_178260 (134800-134590) | |
| 1-307, gnl|panTro1|chr6 (107411024-107411266) | |
| 1-307, gnl|rheMac2|chr3 (143698453-143698696) | |
| 1-307, gnl|rn3|chr6 (51131717-51131504) | |
| 410-596, gnl|bosTau2|chr4 (23461672-23461871) | |
| 410-596, gnl|canFam2|chr18 (17164303-17164110) | |
| 410-596, gnl|dasNov1|scaffold_5079 (68750-68553) | |
| 410-596, gnl|hg17|chr7 (105516891-105517092) | |
| 410-596, gnl|Hg17|chr7 (105517159-105516964) | |
| 410-596, gnl|loxAfr1|scaffold_6685 (87112-87306) | |
| 410-596, gnl|mm7|chr12 (30662442-30662244) | |
| 410-596, gnl|Mm7|chr12 (30662196-30662371) | |
| 410-596, gnl|oryCun1|scaffold_178260 (138269-138071) | |
| 410-596, gnl|panTro1|chr6 (107407990-107408191) | |
| 410-596, gnl|rheMac2|chr3 (143695454-143695660) | |
| 410-596, gnl|rn3|chr6 (51134565-51134369) |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-307, gnl|bosTau2|chr4 (23458216-23458513) | |
| 1-307, gnl|dasNov1|scaffold_5079 (65980-65740) | |
| 1-307, gnl|echTel1|scaffold_290018 (41421-41198) | |
| 1-307, gnl|hg17|chr7 (105519932-105520175) | |
| 1-307, gnl|Hg17|chr7 (105520245-105519938) | |
| 1-307, gnl|loxAfr1|scaffold_220992 (419-641) | |
| 1-307, gnl|mm7|chr12 (30659545-30659341) | |
| 1-307, gnl|Mm7|chr12 (30659254-30659537) | |
| 1-307, gnl|oryCun1|scaffold_178260 (134800-134590) | |
| 1-307, gnl|panTro1|chr6 (107411024-107411266) | |
| 1-307, gnl|rheMac2|chr3 (143698453-143698696) | |
| 1-307, gnl|rn3|chr6 (51131717-51131504) | |
| 410-596, gnl|bosTau2|chr4 (23461672-23461871) | |
| 410-596, gnl|canFam2|chr18 (17164303-17164110) | |
| 410-596, gnl|dasNov1|scaffold_5079 (68750-68553) | |
| 410-596, gnl|hg17|chr7 (105516891-105517092) | |
| 410-596, gnl|Hg17|chr7 (105517159-105516964) | |
| 410-596, gnl|loxAfr1|scaffold_6685 (87112-87306) | |
| 410-596, gnl|mm7|chr12 (30662442-30662244) | |
| 410-596, gnl|Mm7|chr12 (30662196-30662371) | |
| 410-596, gnl|oryCun1|scaffold_178260 (138269-138071) | |
| 410-596, gnl|panTro1|chr6 (107407990-107408191) | |
| 410-596, gnl|rheMac2|chr3 (143695454-143695660) | |
| 410-596, gnl|rn3|chr6 (51134565-51134369) |