Ss1.1-Pey1-36D11.5
|
CTTTACTGCAAAAAGGATGTGGTGGTCATCAATCTACAGAATCACGAGGAAAACTTGTGT
CCTGAATACCCAGTGTCTTGTCCCAACAAGTGTCTGCAGATGATTCCACGAACTGAGGTC
GATGAACACCTCGCTGTGTGTCCGGAAGCTGAGCAAGACTGTCCTTTTAAGCACTATGGC
TGTATGGTCAAGGAAAAACGGGGACACCTGCAGGAGCATGAGCATTCAGCCTTACGGGAC
CACATGCTTCTGGTTTTAGAAAAGAACCTCCAATTAGAAGAACAGATTTCTGACTTATAT
AAAAGCCTAGAACAAAAAGAAAGTAAAATCCAGCAGCTAGCAGAAACTGTAAAGAAATTT
GAAAAGGAGTTCAAGCAGTTTGCACAGTTGTTTGGCAAAAATGGAAACTTCCTCTCAAAT
ATCCAGGTCCTTGCCAGCCACATTGACAAGTCTGCTTGGCTAGAAGTTCAGGTGCGTCAG
TTGTTACAAATGGCTAACCAGCAACAAAGCAAATTTGATCTGAGGCCTTTGGTGGAAGCG
ATCGATGCAATGAAACAGAAAATCACCCTGCTAGAAACAAATGATCAAAGATTAGTTGTT
TTGGAAGGGGAGACTAACAAACATGATGCCCACATTAATATTCATAAAGCGCAGCTGAGT
AAAAATGAGGAGCGGTTTAAACTGCTGGAAAGTGCCTGCTACACTGGAAAGCTCATCTGG
AAGGTGACAGACTACAAGCTGACGAAGAGGGAGGCGCTGGACGGACACACCGTGTCCATC
TTCAGCCAGCCCTTCTACACCAGCCGCTGTGGCTACCGGCTCTGCGCCAGAGCGTACCTG
AATGGGGACGGGTCCGGGAAGGGGACGCACCTGTCG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CTTTACTGCAAAAAGGATGTGGTGGTCATCAATCTACAGAATCACGAGGAAAACTTGTGT
CCTGAATACCCAGTGTCTTGTCCCAACAAGTGTCTGCAGATGATTCCACGAACTGAGGTC
GATGAACACCTCGCTGTGTGTCCGGAAGCTGAGCAAGACTGTCCTTTTAAGCACTATGGC
TGTATGGTCAAGGAAAAACGGGGACACCTGCAGGAGCATGAGCATTCAGCCTTACGGGAC
CACATGCTTCTGGTTTTAGAAAAGAACCTCCAATTAGAAGAACAGATTTCTGACTTATAT
AAAAGCCTAGAACAAAAAGAAAGTAAAATCCAGCAGCTAGCAGAAACTGTAAAGAAATTT
GAAAAGGAGTTCAAGCAGTTTGCACAGTTGTTTGGCAAAAATGGAAACTTCCTCTCAAAT
ATCCAGGTCCTTGCCAGCCACATTGACAAGTCTGCTTGGCTAGAAGTTCAGGTGCGTCAG
TTGTTACAAATGGCTAACCAGCAACAAAGCAAATTTGATCTGAGGCCTTTGGTGGAAGCG
ATCGATGCAATGAAACAGAAAATCACCCTGCTAGAAACAAATGATCAAAGATTAGTTGTT
TTGGAAGGGGAGACTAACAAACATGATGCCCACATTAATATTCATAAAGCGCAGCTGAGT
AAAAATGAGGAGCGGTTTAAACTGCTGGAAAGTGCCTGCTACACTGGAAAGCTCATCTGG
AAGGTGACAGACTACAAGCTGACGAAGAGGGAGGCGCTGGACGGACACACCGTGTCCATC
TTCAGCCAGCCCTTCTACACCAGCCGCTGTGGCTACCGGCTCTGCGCCAGAGCGTACCTG
AATGGGGACGGGTCCGGGAAGGGGACGCACCTGTCG
|
|
gi|55665701|emb|CAH72434.1| |
Protein identifier
|
gi|55665701|emb|CAH72434.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
284-428, gnl|bosTau2|chr16 (50198021-50197877) |
|
284-428, gnl|canFam2|chr7 (12784809-12784965) |
|
284-428, gnl|dasNov1|scaffold_9334 (13300-13144) |
|
284-428, gnl|galGal2|chr3 (18612402-18612241) |
|
284-428, gnl|hg17|chr1 (207931183-207931339) |
|
284-428, gnl|Hg17|chr1 (207931187-207931331) |
|
284-428, gnl|loxAfr1|scaffold_60673 (1453-1610) |
|
284-428, gnl|monDom2|scaffold_13 (15074188-15074345) |
|
284-428, gnl|oryCun1|scaffold_191303 (5389-5233) |
|
284-428, gnl|panTro1|chr1 (191561918-191562074) |
|
284-428, gnl|rheMac2|chr1 (159038468-159038312) |
|
284-428, gnl|xenTro1|scaffold_68 (1760487-1760336) |
| |
|
594-875, gnl|bosTau2|chr16 (50195677-50195396) |
|
594-875, gnl|Hg17|chr1 (207933863-207934144) |
|
594-875, gnl|Mm7|chr1 (191550744-191550463) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
284-428, gnl|bosTau2|chr16 (50198021-50197877) |
|
284-428, gnl|canFam2|chr7 (12784809-12784965) |
|
284-428, gnl|dasNov1|scaffold_9334 (13300-13144) |
|
284-428, gnl|galGal2|chr3 (18612402-18612241) |
|
284-428, gnl|hg17|chr1 (207931183-207931339) |
|
284-428, gnl|Hg17|chr1 (207931187-207931331) |
|
284-428, gnl|loxAfr1|scaffold_60673 (1453-1610) |
|
284-428, gnl|monDom2|scaffold_13 (15074188-15074345) |
|
284-428, gnl|oryCun1|scaffold_191303 (5389-5233) |
|
284-428, gnl|panTro1|chr1 (191561918-191562074) |
|
284-428, gnl|rheMac2|chr1 (159038468-159038312) |
|
284-428, gnl|xenTro1|scaffold_68 (1760487-1760336) |
| |
|
594-875, gnl|bosTau2|chr16 (50195677-50195396) |
|
594-875, gnl|Hg17|chr1 (207933863-207934144) |
|
594-875, gnl|Mm7|chr1 (191550744-191550463) |
