Non-Coding RNA Search

Ss1.1-Pey1-44A09.5

Sequence:


               
               ACTTTGAAGAGTTGGTGGACACATAGGAGGCACCAAAATGTTTGTTGATTGAATAACTTA
GTTGTTACCTAGACCTTTAACATGGAGACTCAAAGTTTGTATTCTGGAGTTAGGTGAAGC
TGTGCTTGTGTGACTTGTTTGCAACAGGAATGTGGATAAATTACTTAACTTCTTTGAACC
TCACCTTTTCTTCATGTCACACACAAATAACGAGACTTTATTGGGCTATAAGCAATAAAT
AAAATAATGCATTTAAAATATTCAGCTTAGTGTAAGTAATAAATGTTATATGCCACCAAT
ATTGTAACATCCACTGTTATTGTAATATCCACTCTTATTCATATTGCCCTGATTTTCCTC
TTACTGTTTGATACTCAATTTCCAAACCTTAATTCTAACGCCCTCTAAGCAGATGTCTGT
ATATGGTTAGACTGACTTACCTATTCTATTTAGTTTCTCTCAGGCTTACTGGAATGTGGC
AGGTTCCTCAATATTCTTAAGTATAAGGTGGGGAGAAAAACACTAAACCTACTGTGTGTC
CATCACCATTTAAGGCACTTGATATTAGCACACTGACTCTTCACAAGAACACCACGGGAT
AGATATTAAATC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACTTTGAAGAGTTGGTGGACACATAGGAGGCACCAAAATGTTTGTTGATTGAATAACTTA
GTTGTTACCTAGACCTTTAACATGGAGACTCAAAGTTTGTATTCTGGAGTTAGGTGAAGC
TGTGCTTGTGTGACTTGTTTGCAACAGGAATGTGGATAAATTACTTAACTTCTTTGAACC
TCACCTTTTCTTCATGTCACACACAAATAACGAGACTTTATTGGGCTATAAGCAATAAAT
AAAATAATGCATTTAAAATATTCAGCTTAGTGTAAGTAATAAATGTTATATGCCACCAAT
ATTGTAACATCCACTGTTATTGTAATATCCACTCTTATTCATATTGCCCTGATTTTCCTC
TTACTGTTTGATACTCAATTTCCAAACCTTAATTCTAACGCCCTCTAAGCAGATGTCTGT
ATATGGTTAGACTGACTTACCTATTCTATTTAGTTTCTCTCAGGCTTACTGGAATGTGGC
AGGTTCCTCAATATTCTTAAGTATAAGGTGGGGAGAAAAACACTAAACCTACTGTGTGTC
CATCACCATTTAAGGCACTTGATATTAGCACACTGACTCTTCACAAGAACACCACGGGAT
AGATATTAAATC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               54-170, + strand, RNAz p=0.602261

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               54-170, + strand, RNAz p=0.602261

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               14-565, gnl|bosTau2|chr5 (67905544-67905003)
               

               
               14-565, gnl|Hg17|chr4 (88617425-88616565)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               14-565, gnl|bosTau2|chr5 (67905544-67905003)
               

               
               14-565, gnl|Hg17|chr4 (88617425-88616565)

	14-565, gnl\|bosTau2\|chr5 (67905544-67905003)
	14-565, gnl\|Hg17\|chr4 (88617425-88616565)