Ss1.1-Pey1-47C05.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCGTCCGCCCGGGAATCCCGGTCGCCAAGGGTTTAACGGCTTACCTGGCAACCCAGGTGC GCCCGGCCAAAAGGGAGAGCCTGGAATCGGGCTGCCAGGACTCAAAGGGCTGCCAGGGCT GCCCGGCACCCCCGGAACCCCTGGGGAGAAGGGAAACATCGGGGGACCAGGAGTTCCTGG AGAGCACGGCGCCATCGGCCCCCCAGGCCTTCAGGGAATCCGAGGTGACCCAGGACCTCC TGGATTGCAAGGTCCCAAAGGAGCACCGGGAGTCCCCGGAATAGGGCCCCCTGGAGCCAT GGGCCCCCCTGGAGGACAGGGGCCCCCAGGATCATCAGGACCCCCTGGAGTGAAAGGAGA GAAGGGCTTTCCGGGATTCCCAGGCCTGGACATGCCGGGCCCCAAAGGAGACAAGGGGCT GCAGGGGCTCCCCGGCCTGACGGGACAGTCAGGGCTGCCTGGCCTCCCTGGACAGCAGGG CACACCCGGGCTGCCCGGGTTTCCAGGTCCCAAGGGAGAGATGGGTGTCATGGGCACCCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCGTCCGCCCGGGAATCCCGGTCGCCAAGGGTTTAACGGCTTACCTGGCAACCCAGGTGC GCCCGGCCAAAAGGGAGAGCCTGGAATCGGGCTGCCAGGACTCAAAGGGCTGCCAGGGCT GCCCGGCACCCCCGGAACCCCTGGGGAGAAGGGAAACATCGGGGGACCAGGAGTTCCTGG AGAGCACGGCGCCATCGGCCCCCCAGGCCTTCAGGGAATCCGAGGTGACCCAGGACCTCC TGGATTGCAAGGTCCCAAAGGAGCACCGGGAGTCCCCGGAATAGGGCCCCCTGGAGCCAT GGGCCCCCCTGGAGGACAGGGGCCCCCAGGATCATCAGGACCCCCTGGAGTGAAAGGAGA GAAGGGCTTTCCGGGATTCCCAGGCCTGGACATGCCGGGCCCCAAAGGAGACAAGGGGCT GCAGGGGCTCCCCGGCCTGACGGGACAGTCAGGGCTGCCTGGCCTCCCTGGACAGCAGGG CACACCCGGGCTGCCCGGGTTTCCAGGTCCCAAGGGAGAGATGGGTGTCATGGGCACCCC |
| Predicted RNA structure(s): 3 entry(ies) | More info |
| Predicted RNA structure(s): 3 entry(ies) | Help | Less info |
| 38-229, - strand, RNAz p=0.986205 | |
| 77-229, - strand, RNAz p=0.531746 | |
| 335-508, + strand, RNAz p=0.989691 |
| Predicted RNA structure(s): 3 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 38-229, - strand, RNAz p=0.986205 | |
| 77-229, - strand, RNAz p=0.531746 | |
| 335-508, + strand, RNAz p=0.989691 |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 38-229, gnl|bosTau2|chr12 (46524167-46524356) | |
| 38-229, gnl|canFam2|chr22 (61488045-61488169) | |
| 38-229, gnl|danRer3|chr9 (10111802-10111927) | |
| 38-229, gnl|dasNov1|scaffold_88 (35719-35843) | |
| 38-229, gnl|fr1|chrUn (237525745-237525614) | |
| 38-229, gnl|galGal2|chr1 (131822906-131823030) | |
| 38-229, gnl|hg17|chr13 (109629611-109629735) | |
| 38-229, gnl|Hg17|chr13 (109629796-109629614) | |
| 38-229, gnl|loxAfr1|scaffold_142753 (3809-3933) | |
| 38-229, gnl|mm7|chr8 (11189294-11189416) | |
| 38-229, gnl|Mm7|chr8 (11189486-11189295) | |
| 38-229, gnl|monDom2|scaffold_11 (37084703-37084583) | |
| 38-229, gnl|oryCun1|scaffold_185949 (57478-57371) | |
| 38-229, gnl|panTro1|chr14 (93066967-93067091) | |
| 38-229, gnl|rheMac2|chr17 (90267790-90267914) | |
| 38-229, gnl|rn3|chr16 (83119577-83119459) | |
| 38-229, gnl|tetNig1|chr2 (9484419-9484301) | |
| 38-229, gnl|xenTro1|scaffold_77 (205639-205539) | |
| 335-508, gnl|bosTau2|chr12 (46525515-46525688) | |
| 335-508, gnl|Hg17|chr13 (109628584-109628410) | |
| 335-508, gnl|Mm7|chr8 (11188391-11188218) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 38-229, gnl|bosTau2|chr12 (46524167-46524356) | |
| 38-229, gnl|canFam2|chr22 (61488045-61488169) | |
| 38-229, gnl|danRer3|chr9 (10111802-10111927) | |
| 38-229, gnl|dasNov1|scaffold_88 (35719-35843) | |
| 38-229, gnl|fr1|chrUn (237525745-237525614) | |
| 38-229, gnl|galGal2|chr1 (131822906-131823030) | |
| 38-229, gnl|hg17|chr13 (109629611-109629735) | |
| 38-229, gnl|Hg17|chr13 (109629796-109629614) | |
| 38-229, gnl|loxAfr1|scaffold_142753 (3809-3933) | |
| 38-229, gnl|mm7|chr8 (11189294-11189416) | |
| 38-229, gnl|Mm7|chr8 (11189486-11189295) | |
| 38-229, gnl|monDom2|scaffold_11 (37084703-37084583) | |
| 38-229, gnl|oryCun1|scaffold_185949 (57478-57371) | |
| 38-229, gnl|panTro1|chr14 (93066967-93067091) | |
| 38-229, gnl|rheMac2|chr17 (90267790-90267914) | |
| 38-229, gnl|rn3|chr16 (83119577-83119459) | |
| 38-229, gnl|tetNig1|chr2 (9484419-9484301) | |
| 38-229, gnl|xenTro1|scaffold_77 (205639-205539) | |
| 335-508, gnl|bosTau2|chr12 (46525515-46525688) | |
| 335-508, gnl|Hg17|chr13 (109628584-109628410) | |
| 335-508, gnl|Mm7|chr8 (11188391-11188218) |