Non-Coding RNA Search

Ss1.1-Pey1-52G10.5

Sequence:


               
               AGGATGTCGATTTGGGGATGAGAAGCGAAACATGGGAACTGGCGGCCCCCTAACCAGGCA
AAGGCCGGTGGCCCGGGGCACGGCCCACCCGGGCGCCGGCCGGATGCGGCGTGGCCCGAG
CGTCACGGCCGCCCGCCGCCTCTCGTAACCCCTGGCGCCCGCCGCCCGCGCAGCTCGCGC
CAATTCTCGGAACAGCTCCGCGTCGGGTGCGGCGCGGGGCTGCGGAGCAGGGGCCAGACT
CCTGAGCAATTTGCGTAGCGGACGGCGCCCGCGCAGGCGCAGGAGGGGGCGGAGCCGCGG
GAGCCGGGGAGCCGGAGCCCCGGGTCCCAGCGACCGGAGCCCGCTCCTCCAGCGGCGGCT
TGAAGATCCGGCGTCGGCCTCCTTCCGCCCCCTACGGCTGCAGAGTGGACGCAGTGTGGG
GTGGTGCGGTGGGCCAGCGTCCGGAATTCCGAGGACTGAAGGCGGAGGCCCTCCCTTTCC
GGATTGTTGGAGGGGAGAGAGCCCCCCAGTTTGGGGAGGGGGAGAGCCGGGCGTTGAGCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGATGTCGATTTGGGGATGAGAAGCGAAACATGGGAACTGGCGGCCCCCTAACCAGGCA
AAGGCCGGTGGCCCGGGGCACGGCCCACCCGGGCGCCGGCCGGATGCGGCGTGGCCCGAG
CGTCACGGCCGCCCGCCGCCTCTCGTAACCCCTGGCGCCCGCCGCCCGCGCAGCTCGCGC
CAATTCTCGGAACAGCTCCGCGTCGGGTGCGGCGCGGGGCTGCGGAGCAGGGGCCAGACT
CCTGAGCAATTTGCGTAGCGGACGGCGCCCGCGCAGGCGCAGGAGGGGGCGGAGCCGCGG
GAGCCGGGGAGCCGGAGCCCCGGGTCCCAGCGACCGGAGCCCGCTCCTCCAGCGGCGGCT
TGAAGATCCGGCGTCGGCCTCCTTCCGCCCCCTACGGCTGCAGAGTGGACGCAGTGTGGG
GTGGTGCGGTGGGCCAGCGTCCGGAATTCCGAGGACTGAAGGCGGAGGCCCTCCCTTTCC
GGATTGTTGGAGGGGAGAGAGCCCCCCAGTTTGGGGAGGGGGAGAGCCGGGCGTTGAGCG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               426-540, - strand, RNAz p=0.934115

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               426-540, - strand, RNAz p=0.934115

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               4-540, gnl|bosTau2|chr29 (33400121-33400654)
               

               
               4-540, gnl|Hg17|chr11 (63809601-63810149)
               

               
               4-540, gnl|Mm7|chr19 (6761635-6761127)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-540, gnl|bosTau2|chr29 (33400121-33400654)
               

               
               4-540, gnl|Hg17|chr11 (63809601-63810149)
               

               
               4-540, gnl|Mm7|chr19 (6761635-6761127)

	4-540, gnl\|bosTau2\|chr29 (33400121-33400654)
	4-540, gnl\|Hg17\|chr11 (63809601-63810149)
	4-540, gnl\|Mm7\|chr19 (6761635-6761127)