Ss1.1-Pey1-54A01.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGCACCACGACGGGAACTCCAAGAAATAGTGAGATTTAATGAGAGCCATAGCTAAGACTA GAATTCACCCTGTCTTACATGGAAATAGAACAATTATAACCCAGTGTGTGTATTTCCTCA AGATTAAGTATTATTTTTCTAGAATTTTCCTTTTTATTGTGGGAGTTGTGACCCTCAGAA TGCTGCAAATCTGATTCCATCATATCAGATGGAATAACAGAATTTTAATAGAATTCTAGC CACGCCAGATTGCAGCTTGTGGTACACATTTTCCATAATTCTAAATGATCTAGAATTTAA TTACATAGTTTTTAGCTGCTGAGGATACTGACTTCCTTTCTTCCTCCAGACAGATAGTGG GATTTAGCCATTGTAAAATAACAAGGTAAAAAGTGGATGAGAAAAAAGGTCTAATTCCAT TTTGATCTTATCAGCACTTGTAAAGGACACATACAGGAACTGGAAACTGCTTAATGTGGA ATTTGACTATTATCTGTGTTTCTCTTCAGCCTGTGAGAGTGTTTCAGTATTGTTCCTCTA CAAAGTTAGTTCCTATTTCTCCAAGTAGGAGAAACCATATATTAAACATTTTCACTAATT NTAATTAAAAGCGCACCTTTTGGTAAGTCCCATTTA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGCACCACGACGGGAACTCCAAGAAATAGTGAGATTTAATGAGAGCCATAGCTAAGACTA GAATTCACCCTGTCTTACATGGAAATAGAACAATTATAACCCAGTGTGTGTATTTCCTCA AGATTAAGTATTATTTTTCTAGAATTTTCCTTTTTATTGTGGGAGTTGTGACCCTCAGAA TGCTGCAAATCTGATTCCATCATATCAGATGGAATAACAGAATTTTAATAGAATTCTAGC CACGCCAGATTGCAGCTTGTGGTACACATTTTCCATAATTCTAAATGATCTAGAATTTAA TTACATAGTTTTTAGCTGCTGAGGATACTGACTTCCTTTCTTCCTCCAGACAGATAGTGG GATTTAGCCATTGTAAAATAACAAGGTAAAAAGTGGATGAGAAAAAAGGTCTAATTCCAT TTTGATCTTATCAGCACTTGTAAAGGACACATACAGGAACTGGAAACTGCTTAATGTGGA ATTTGACTATTATCTGTGTTTCTCTTCAGCCTGTGAGAGTGTTTCAGTATTGTTCCTCTA CAAAGTTAGTTCCTATTTCTCCAAGTAGGAGAAACCATATATTAAACATTTTCACTAATT NTAATTAAAAGCGCACCTTTTGGTAAGTCCCATTTA |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 138-337, - strand, RNAz p=0.957721 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 138-337, - strand, RNAz p=0.957721 |
| Aligned organism(s): 26 entry(ies) | More info |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
| 22-513, gnl|bosTau2|chr14 (48102909-48102427) | |
| 22-513, gnl|canFam2|chr29 (35713168-35713466) | |
| 22-513, gnl|dasNov1|scaffold_9191 (54856-54562) | |
| 22-513, gnl|echTel1|scaffold_213780 (5562-5838) | |
| 22-513, gnl|hg17|chr8 (87625375-87625672) | |
| 22-513, gnl|Hg17|chr8 (87625377-87625857) | |
| 22-513, gnl|loxAfr1|scaffold_4878 (51194-51488) | |
| 22-513, gnl|mm7|chr4 (19464362-19464129) | |
| 22-513, gnl|monDom2|scaffold_3 (81519585-81519305) | |
| 22-513, gnl|oryCun1|scaffold_199575 (159551-159264) | |
| 22-513, gnl|panTro1|chr7 (89746453-89746750) | |
| 22-513, gnl|rheMac2|chr8 (89122367-89122665) | |
| 22-513, gnl|rn3|chr5 (34172928-34172702) | |
| 514-636, gnl|bosTau2|chr14 (48102386-48102268) | |
| 514-636, gnl|canFam2|chr29 (35713467-35713782) | |
| 514-636, gnl|dasNov1|scaffold_9191 (54561-54259) | |
| 514-636, gnl|echTel1|scaffold_213780 (5839-6124) | |
| 514-636, gnl|hg17|chr8 (87625673-87625991) | |
| 514-636, gnl|Hg17|chr8 (87625898-87626017) | |
| 514-636, gnl|mm7|chr4 (19464128-19463843) | |
| 514-636, gnl|Mm7|chr4 (19463931-19463830) | |
| 514-636, gnl|monDom2|scaffold_3 (81519304-81518902) | |
| 514-636, gnl|oryCun1|scaffold_199575 (159263-158945) | |
| 514-636, gnl|panTro1|chr7 (89746751-89747068) | |
| 514-636, gnl|rheMac2|chr8 (89122666-89122990) | |
| 514-636, gnl|rn3|chr5 (34172701-34172415) |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 22-513, gnl|bosTau2|chr14 (48102909-48102427) | |
| 22-513, gnl|canFam2|chr29 (35713168-35713466) | |
| 22-513, gnl|dasNov1|scaffold_9191 (54856-54562) | |
| 22-513, gnl|echTel1|scaffold_213780 (5562-5838) | |
| 22-513, gnl|hg17|chr8 (87625375-87625672) | |
| 22-513, gnl|Hg17|chr8 (87625377-87625857) | |
| 22-513, gnl|loxAfr1|scaffold_4878 (51194-51488) | |
| 22-513, gnl|mm7|chr4 (19464362-19464129) | |
| 22-513, gnl|monDom2|scaffold_3 (81519585-81519305) | |
| 22-513, gnl|oryCun1|scaffold_199575 (159551-159264) | |
| 22-513, gnl|panTro1|chr7 (89746453-89746750) | |
| 22-513, gnl|rheMac2|chr8 (89122367-89122665) | |
| 22-513, gnl|rn3|chr5 (34172928-34172702) | |
| 514-636, gnl|bosTau2|chr14 (48102386-48102268) | |
| 514-636, gnl|canFam2|chr29 (35713467-35713782) | |
| 514-636, gnl|dasNov1|scaffold_9191 (54561-54259) | |
| 514-636, gnl|echTel1|scaffold_213780 (5839-6124) | |
| 514-636, gnl|hg17|chr8 (87625673-87625991) | |
| 514-636, gnl|Hg17|chr8 (87625898-87626017) | |
| 514-636, gnl|mm7|chr4 (19464128-19463843) | |
| 514-636, gnl|Mm7|chr4 (19463931-19463830) | |
| 514-636, gnl|monDom2|scaffold_3 (81519304-81518902) | |
| 514-636, gnl|oryCun1|scaffold_199575 (159263-158945) | |
| 514-636, gnl|panTro1|chr7 (89746751-89747068) | |
| 514-636, gnl|rheMac2|chr8 (89122666-89122990) | |
| 514-636, gnl|rn3|chr5 (34172701-34172415) |