Ss1.1-Pig1-101D06.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGTAGATGTTTTCCTGTCTATCCTTTGTGACAGGGCCTTTTACATGAGTGTTTTTTCTTT TTGTATGTGTTATGTGTTTGTTGTATTAAATAAAGAGGAATGTACATAAAAAAAAAAAAA AAAAAAAAAAAGGGGGGCGCCCTTTTAAATTTCCCCCCGGGGGCCCCAAATTACCCCCCC CCCATTTTTTTTTAAAAAAGGGGCCCCTTAGGGGGGGATTTTTAAACTCTAGCCCCCGCC CGGGTTTTACAACCGGTGGGAGGCGGAAAAACCAGG------------AGCAGCAGGAAG GTGCCAAGGCCCTGGCAGGGAACAAGGACACCCTGGACCGTGTCCCAAGCCCCAAGTGGG GCCCTGAGCCCGACCGTGACCACCTGTACCACAGCTGGCCGCAGGAGGCCCAGGAGGAGG CCAGGCCCTGGGCCCGGGCGCTGCCACCTCGCCAAGTGCTTCAAGGAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGTAGATGTTTTCCTGTCTATCCTTTGTGACAGGGCCTTTTACATGAGTGTTTTTTCTTT TTGTATGTGTTATGTGTTTGTTGTATTAAATAAAGAGGAATGTACATAAAAAAAAAAAAA AAAAAAAAAAAGGGGGGCGCCCTTTTAAATTTCCCCCCGGGGGCCCCAAATTACCCCCCC CCCATTTTTTTTTAAAAAAGGGGCCCCTTAGGGGGGGATTTTTAAACTCTAGCCCCCGCC CGGGTTTTACAACCGGTGGGAGGCGGAAAAACCAGG------------AGCAGCAGGAAG GTGCCAAGGCCCTGGCAGGGAACAAGGACACCCTGGACCGTGTCCCAAGCCCCAAGTGGG GCCCTGAGCCCGACCGTGACCACCTGTACCACAGCTGGCCGCAGGAGGCCCAGGAGGAGG CCAGGCCCTGGGCCCGGGCGCTGCCACCTCGCCAAGTGCTTCAAGGAC |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 289-388, + strand, RNAz p=0.731574 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 289-388, + strand, RNAz p=0.731574 |
| Aligned organism(s): 23 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
| 1-108, gnl|bosTau2|chr4 (59725060-59724955) | |
| 1-108, gnl|canFam2|chr16 (12400280-12400088) | |
| 1-108, gnl|dasNov1|scaffold_194428 (2756-2951) | |
| 1-108, gnl|echTel1|scaffold_283143 (46227-46405) | |
| 1-108, gnl|galGal2|chr1 (45846907-45847100) | |
| 1-108, gnl|hg17|chr7 (138450053-138450251) | |
| 1-108, gnl|Hg17|chr7 (138450126-138450234) | |
| 1-108, gnl|mm7|chr6 (38443507-38443702) | |
| 1-108, gnl|Mm7|chr6 (38443577-38443686) | |
| 1-108, gnl|monDom2|scaffold_22 (2999150-2998942) | |
| 1-108, gnl|oryCun1|scaffold_207273 (19132-18948) | |
| 1-108, gnl|panTro1|chr6 (141201434-141201632) | |
| 1-108, gnl|rheMac2|chr3 (176805416-176805614) | |
| 1-108, gnl|rn3|chr4 (66349280-66349471) | |
| 287-454, gnl|bosTau2|chr26 (34973604-34973437) | |
| 287-454, gnl|canFam2|chr28 (43923651-43923893) | |
| 287-454, gnl|hg17|chr10 (135054601-135054864) | |
| 287-454, gnl|Hg17|chr10 (135054630-135054785) | |
| 287-454, gnl|mm7|chr7 (136510638-136510917) | |
| 287-454, gnl|Mm7|chr7 (136510667-136510834) | |
| 287-454, gnl|panTro1|chr8 (137889316-137889579) | |
| 287-454, gnl|rheMac2|chr9 (132988383-132988657) | |
| 287-454, gnl|rn3|chr1 (200043070-200043349) |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-108, gnl|bosTau2|chr4 (59725060-59724955) | |
| 1-108, gnl|canFam2|chr16 (12400280-12400088) | |
| 1-108, gnl|dasNov1|scaffold_194428 (2756-2951) | |
| 1-108, gnl|echTel1|scaffold_283143 (46227-46405) | |
| 1-108, gnl|galGal2|chr1 (45846907-45847100) | |
| 1-108, gnl|hg17|chr7 (138450053-138450251) | |
| 1-108, gnl|Hg17|chr7 (138450126-138450234) | |
| 1-108, gnl|mm7|chr6 (38443507-38443702) | |
| 1-108, gnl|Mm7|chr6 (38443577-38443686) | |
| 1-108, gnl|monDom2|scaffold_22 (2999150-2998942) | |
| 1-108, gnl|oryCun1|scaffold_207273 (19132-18948) | |
| 1-108, gnl|panTro1|chr6 (141201434-141201632) | |
| 1-108, gnl|rheMac2|chr3 (176805416-176805614) | |
| 1-108, gnl|rn3|chr4 (66349280-66349471) | |
| 287-454, gnl|bosTau2|chr26 (34973604-34973437) | |
| 287-454, gnl|canFam2|chr28 (43923651-43923893) | |
| 287-454, gnl|hg17|chr10 (135054601-135054864) | |
| 287-454, gnl|Hg17|chr10 (135054630-135054785) | |
| 287-454, gnl|mm7|chr7 (136510638-136510917) | |
| 287-454, gnl|Mm7|chr7 (136510667-136510834) | |
| 287-454, gnl|panTro1|chr8 (137889316-137889579) | |
| 287-454, gnl|rheMac2|chr9 (132988383-132988657) | |
| 287-454, gnl|rn3|chr1 (200043070-200043349) |