Ss1.1-Pig1-101H24.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCAGGCTCCTACAACCCCATGACGCTCGGCCTCTTCACGCTGGTCTACTTCTTCCTGGCC TGCTGGACCTACGGGCTCACGGTGTCGGCCGGCGTCTTCATCCCGTCCCTACTCATTGGG GCCGCCTGGGGCCGCCTCTTCGGCATCTCCCTGTCCTACATCACTGGGGCCGCGATCTGG GCAGACCCCGGCAAGTACGCCCTCATGGGAGCGGCTGCCCAGCTGGGCGGCATCGTGCGG ATGACGCTGAGCCTGACGGTCATCATGATGGAGGCCACCAGCAACGTGACCTACGGCTTC CCCATCATGCTGGTGCTCATGACCGCCAAGATCGTGGGCGACGTCTTCATTGAGGGCCTG TACGACATGCACATCCAGCTGCAGAGCGTGCCCTTCCTGCACTGGGAGGCCCCCGTCACC TCGCACTCGCTCACCGCCAGGGAGGTGATGAGCGCGCCGGTCACCTGCCTGCGGAGGAGG GAGAAGGTGGGCGTCATCGTGGACGTGCTGAGCAGCTCGGCCTCCAACCACAACGGCTTC CCCGTGGTGGACGGCGCCGATGCCGCGCAGCCGCCGCGGCTCCAGGGCTTGATCCTGCGT TCCCAGCTTATCGTCCTGCTGAAGCACAAGGTGTTCGTGGAGCGCTCCAGCATGGGCCTG GTGCGGCGCCGGCTGCGGCTGAAGGACTTCCGCGACGCCTACCCGCGCTTCCCCCCAATC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCAGGCTCCTACAACCCCATGACGCTCGGCCTCTTCACGCTGGTCTACTTCTTCCTGGCC TGCTGGACCTACGGGCTCACGGTGTCGGCCGGCGTCTTCATCCCGTCCCTACTCATTGGG GCCGCCTGGGGCCGCCTCTTCGGCATCTCCCTGTCCTACATCACTGGGGCCGCGATCTGG GCAGACCCCGGCAAGTACGCCCTCATGGGAGCGGCTGCCCAGCTGGGCGGCATCGTGCGG ATGACGCTGAGCCTGACGGTCATCATGATGGAGGCCACCAGCAACGTGACCTACGGCTTC CCCATCATGCTGGTGCTCATGACCGCCAAGATCGTGGGCGACGTCTTCATTGAGGGCCTG TACGACATGCACATCCAGCTGCAGAGCGTGCCCTTCCTGCACTGGGAGGCCCCCGTCACC TCGCACTCGCTCACCGCCAGGGAGGTGATGAGCGCGCCGGTCACCTGCCTGCGGAGGAGG GAGAAGGTGGGCGTCATCGTGGACGTGCTGAGCAGCTCGGCCTCCAACCACAACGGCTTC CCCGTGGTGGACGGCGCCGATGCCGCGCAGCCGCCGCGGCTCCAGGGCTTGATCCTGCGT TCCCAGCTTATCGTCCTGCTGAAGCACAAGGTGTTCGTGGAGCGCTCCAGCATGGGCCTG GTGCGGCGCCGGCTGCGGCTGAAGGACTTCCGCGACGCCTACCCGCGCTTCCCCCCAATC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 226-355, + strand, RNAz p=0.935356 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 226-355, + strand, RNAz p=0.935356 |
| Aligned organism(s): 23 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
| 1-174, gnl|bosTau2|chr25 (3800870-3801043) | |
| 1-174, gnl|Hg17|chr16 (1440672-1440499) | |
| 1-174, gnl|Mm7|chr17 (23338455-23338628) | |
| 226-355, gnl|bosTau2|chr25 (3802181-3802310) | |
| 226-355, gnl|Hg17|chr16 (1439096-1438967) | |
| 226-355, gnl|Mm7|chr17 (23340230-23340359) | |
| 429-570, gnl|bosTau2|chr25 (3802577-3802718) | |
| 429-570, gnl|canFam2|chr6 (42394794-42394646) | |
| 429-570, gnl|danRer3|chr3 (20074957-20075102) | |
| 429-570, gnl|dasNov1|scaffold_107901 (4431-4577) | |
| 429-570, gnl|echTel1|scaffold_305949 (1619-1744) | |
| 429-570, gnl|fr1|chrUn (265427302-265427453) | |
| 429-570, gnl|hg17|chr16 (1438352-1438500) | |
| 429-570, gnl|Hg17|chr16 (1438499-1438357) | |
| 429-570, gnl|loxAfr1|scaffold_34427 (421-572) | |
| 429-570, gnl|mm7|chr17 (23341099-23340951) | |
| 429-570, gnl|Mm7|chr17 (23340951-23341092) | |
| 429-570, gnl|monDom2|scaffold_5 (122663562-122663414) | |
| 429-570, gnl|panTro1|chr18 (1511500-1511648) | |
| 429-570, gnl|rheMac2|chr20 (1433940-1434088) | |
| 429-570, gnl|rn3|chr10 (14401724-14401576) | |
| 429-570, gnl|tetNig1|chrUn_random (40319412-40319259) | |
| 429-570, gnl|xenTro1|scaffold_409 (21388-21523) |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-174, gnl|bosTau2|chr25 (3800870-3801043) | |
| 1-174, gnl|Hg17|chr16 (1440672-1440499) | |
| 1-174, gnl|Mm7|chr17 (23338455-23338628) | |
| 226-355, gnl|bosTau2|chr25 (3802181-3802310) | |
| 226-355, gnl|Hg17|chr16 (1439096-1438967) | |
| 226-355, gnl|Mm7|chr17 (23340230-23340359) | |
| 429-570, gnl|bosTau2|chr25 (3802577-3802718) | |
| 429-570, gnl|canFam2|chr6 (42394794-42394646) | |
| 429-570, gnl|danRer3|chr3 (20074957-20075102) | |
| 429-570, gnl|dasNov1|scaffold_107901 (4431-4577) | |
| 429-570, gnl|echTel1|scaffold_305949 (1619-1744) | |
| 429-570, gnl|fr1|chrUn (265427302-265427453) | |
| 429-570, gnl|hg17|chr16 (1438352-1438500) | |
| 429-570, gnl|Hg17|chr16 (1438499-1438357) | |
| 429-570, gnl|loxAfr1|scaffold_34427 (421-572) | |
| 429-570, gnl|mm7|chr17 (23341099-23340951) | |
| 429-570, gnl|Mm7|chr17 (23340951-23341092) | |
| 429-570, gnl|monDom2|scaffold_5 (122663562-122663414) | |
| 429-570, gnl|panTro1|chr18 (1511500-1511648) | |
| 429-570, gnl|rheMac2|chr20 (1433940-1434088) | |
| 429-570, gnl|rn3|chr10 (14401724-14401576) | |
| 429-570, gnl|tetNig1|chrUn_random (40319412-40319259) | |
| 429-570, gnl|xenTro1|scaffold_409 (21388-21523) |