Ss1.1-Pig1-106F03.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTGCCCCGCGACGTGGTCCGGCACATGAGATCCACTGACAGCCAGTGCGGCACTGTGATG GACGTCAGCATCGACTGCGCCGTCAAGCTCATCGGCACCAACTGCATCATCTACCCCGTC AACAGCCGGGACCTCCAGCACATCTGGCCCTTCATGTATGGGGACTACATCGCCTACGAC TGCTGGCTGGGGAAGGTCTACGACCTGAAGAACCAGATCATCCTCAAGCTGTCCAACGGC GCCAGGTGCTCCATGAACACAGAAGACGGCGCTAAGCTCTACGACGTCTGCCCGCATGTC AGCGACTCTGGCCTCTTCTTCGATGACTCCTACGGCTTCTACCCAGGCCAGGTGCTCATC GGCCCTGCCAAGATCTTCTCCAGCGTCCAGTGGCTCTCGGGGGTCAAGCCGGTGCTCAGC ACCAAGAGCAAGTTCCGCGTGGTGGTGGAAGAGGTGCAGGTGGTGGAGCTGAAGGTGACG TGGATTACCAAGAGCTTCTGCCCAGGGGGCACAGACAGCGTCAGCCCCCCGCCCTCTGTC ATCACCCAGGAAAACCTAGGCAGGGTGAAGCGTCTCGGATGCTTTGACCATGCTCAGCGG CAGCTGGGGGAGCGCTGTCTTTATGTCTTCCCAGCCAAGGTAGAGCCGGCCAGGATTGCC TGTGAATGTCCAGAAAAACACTGCGCCCAGGGGGAGGGCTCTATGGCCAAGAAGGTGAAG CGCCTCTTGAAGAAGCAGGTCGTGAGGATCATGTCGTGCTCCCCGGACACCCCGTGCCCC CGGGACCATTCCGTGGAGGACGCGGCGGGCAAGAAGGGGGGCGCCAAAGCCAAGAGCGAG ACGGGGTCCACCAGCCCCGAGGGCACGCCCGGCGGGTCCGCCAGCCCCGAGGAGATGCAG GACGAGGGCCCGGAGGAGGCACAGGAGGCCGGCGAGCAGCTGCCCCCCTTCCTGCTGAAG GAAGCGGGGGACGACAGGCTGCACTCAGCCGAGCAGGACGCGGATGATGAGGCCGCCGAC GACACGGATGACACCAGCTCCGTGACCTCCTCCGCCAGCTCCACCACCTCCTCCCAGAGT GGCAGTGGCGCAAGTCGCAAAAAGAGCATACCCTTTTCTATCAAGAACCTAAAGCGGAAG CACAGGCGGAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTGCCCCGCGACGTGGTCCGGCACATGAGATCCACTGACAGCCAGTGCGGCACTGTGATG GACGTCAGCATCGACTGCGCCGTCAAGCTCATCGGCACCAACTGCATCATCTACCCCGTC AACAGCCGGGACCTCCAGCACATCTGGCCCTTCATGTATGGGGACTACATCGCCTACGAC TGCTGGCTGGGGAAGGTCTACGACCTGAAGAACCAGATCATCCTCAAGCTGTCCAACGGC GCCAGGTGCTCCATGAACACAGAAGACGGCGCTAAGCTCTACGACGTCTGCCCGCATGTC AGCGACTCTGGCCTCTTCTTCGATGACTCCTACGGCTTCTACCCAGGCCAGGTGCTCATC GGCCCTGCCAAGATCTTCTCCAGCGTCCAGTGGCTCTCGGGGGTCAAGCCGGTGCTCAGC ACCAAGAGCAAGTTCCGCGTGGTGGTGGAAGAGGTGCAGGTGGTGGAGCTGAAGGTGACG TGGATTACCAAGAGCTTCTGCCCAGGGGGCACAGACAGCGTCAGCCCCCCGCCCTCTGTC ATCACCCAGGAAAACCTAGGCAGGGTGAAGCGTCTCGGATGCTTTGACCATGCTCAGCGG CAGCTGGGGGAGCGCTGTCTTTATGTCTTCCCAGCCAAGGTAGAGCCGGCCAGGATTGCC TGTGAATGTCCAGAAAAACACTGCGCCCAGGGGGAGGGCTCTATGGCCAAGAAGGTGAAG CGCCTCTTGAAGAAGCAGGTCGTGAGGATCATGTCGTGCTCCCCGGACACCCCGTGCCCC CGGGACCATTCCGTGGAGGACGCGGCGGGCAAGAAGGGGGGCGCCAAAGCCAAGAGCGAG ACGGGGTCCACCAGCCCCGAGGGCACGCCCGGCGGGTCCGCCAGCCCCGAGGAGATGCAG GACGAGGGCCCGGAGGAGGCACAGGAGGCCGGCGAGCAGCTGCCCCCCTTCCTGCTGAAG GAAGCGGGGGACGACAGGCTGCACTCAGCCGAGCAGGACGCGGATGATGAGGCCGCCGAC GACACGGATGACACCAGCTCCGTGACCTCCTCCGCCAGCTCCACCACCTCCTCCCAGAGT GGCAGTGGCGCAAGTCGCAAAAAGAGCATACCCTTTTCTATCAAGAACCTAAAGCGGAAG CACAGGCGGAAA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 1032-1151, - strand, RNAz p=0.766683 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 1032-1151, - strand, RNAz p=0.766683 |
| Aligned organism(s): 24 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
| 147-249, gnl|bosTau2|chr19 (49267364-49267466) | |
| 147-249, gnl|canFam2|chr9 (7297796-7297689) | |
| 147-249, gnl|danRer3|chrNA (19491630-19491523) | |
| 147-249, gnl|dasNov1|scaffold_139596 (7313-7420) | |
| 147-249, gnl|fr1|chrUn (302102121-302102015) | |
| 147-249, gnl|galGal2|chr18 (4234620-4234513) | |
| 147-249, gnl|hg17|chr17 (71910276-71910383) | |
| 147-249, gnl|Hg17|chr17 (71910376-71910274) | |
| 147-249, gnl|loxAfr1|scaffold_130728 (4138-4245) | |
| 147-249, gnl|mm7|chr11 (116655914-116656021) | |
| 147-249, gnl|Mm7|chr11 (116656014-116655914) | |
| 147-249, gnl|monDom2|scaffold_18 (34686809-34686915) | |
| 147-249, gnl|oryCun1|scaffold_143104 (8357-8250) | |
| 147-249, gnl|panTro1|chr19 (75275153-75275260) | |
| 147-249, gnl|rheMac2|chr16 (71759097-71759204) | |
| 147-249, gnl|rn3|chr10 (106671731-106671838) | |
| 147-249, gnl|tetNig1|chrUn_random (27263287-27263182) | |
| 147-249, gnl|xenTro1|scaffold_135 (1871801-1871694) | |
| 310-505, gnl|bosTau2|chr19 (49268677-49268868) | |
| 310-505, gnl|Hg17|chr17 (71908830-71908617) | |
| 310-505, gnl|Mm7|chr11 (116655022-116654830) | |
| 713-1151, gnl|bosTau2|chr19 (49269707-49270142) | |
| 713-1151, gnl|Hg17|chr17 (71907599-71907164) | |
| 713-1151, gnl|Mm7|chr11 (116653867-116653432) |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 147-249, gnl|bosTau2|chr19 (49267364-49267466) | |
| 147-249, gnl|canFam2|chr9 (7297796-7297689) | |
| 147-249, gnl|danRer3|chrNA (19491630-19491523) | |
| 147-249, gnl|dasNov1|scaffold_139596 (7313-7420) | |
| 147-249, gnl|fr1|chrUn (302102121-302102015) | |
| 147-249, gnl|galGal2|chr18 (4234620-4234513) | |
| 147-249, gnl|hg17|chr17 (71910276-71910383) | |
| 147-249, gnl|Hg17|chr17 (71910376-71910274) | |
| 147-249, gnl|loxAfr1|scaffold_130728 (4138-4245) | |
| 147-249, gnl|mm7|chr11 (116655914-116656021) | |
| 147-249, gnl|Mm7|chr11 (116656014-116655914) | |
| 147-249, gnl|monDom2|scaffold_18 (34686809-34686915) | |
| 147-249, gnl|oryCun1|scaffold_143104 (8357-8250) | |
| 147-249, gnl|panTro1|chr19 (75275153-75275260) | |
| 147-249, gnl|rheMac2|chr16 (71759097-71759204) | |
| 147-249, gnl|rn3|chr10 (106671731-106671838) | |
| 147-249, gnl|tetNig1|chrUn_random (27263287-27263182) | |
| 147-249, gnl|xenTro1|scaffold_135 (1871801-1871694) | |
| 310-505, gnl|bosTau2|chr19 (49268677-49268868) | |
| 310-505, gnl|Hg17|chr17 (71908830-71908617) | |
| 310-505, gnl|Mm7|chr11 (116655022-116654830) | |
| 713-1151, gnl|bosTau2|chr19 (49269707-49270142) | |
| 713-1151, gnl|Hg17|chr17 (71907599-71907164) | |
| 713-1151, gnl|Mm7|chr11 (116653867-116653432) |