Non-Coding RNA Search

Ss1.1-Pig1-107A21.5

Sequence:


               
               TGTGCCAGAATACAATCTCAGCATTACGGCTCGAGACGCGGGAGCCCCTTCCCTCTCAGC
CCTCACGACCGTGCGCGTGCAAGTGTCGGACATCAACGACAACCCTCCCCAGTGCCCACA
ATCTTCCTATGATGTTTACGTGGAGGAGAATAACCTCCCTGGTGCTCCGATTCTGAACCT
AAGCGTCTGGGACCCCGACGCCCCGCAGAATGCTCGCCTTTCCTTCTCTCTCTTGGAGCA
AGGAGCTGAAAGTGGGCTAGTGGGTCGCTATTTCACGATAAATCGTGACAGTGGCGTAGT
GTCATCCTTAGTGCCCCTGGACTATGAGGATCGGCGGGAGTTCGAATTAACAGCTCATAT
CAGCGATGGGGGCACTCCAGTCCTGGCCACCAACATCAGCGTGAACATATTTGTCACTGA
TCGCAACGACAACGCCCCCCAGGTCCTATACCCCCGGCCTGGCCAGAGCTCAGTGGAGAT
GCTGCCTCGAGGTACGGCTGCCGGTCATGTGGTCACGCGGGTGGTAGGCTGGGACCCGGA
TGCAGGACACAACGCCTGGCTCTCCTACAGCCTCTTGGGTGCCCCCAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGTGCCAGAATACAATCTCAGCATTACGGCTCGAGACGCGGGAGCCCCTTCCCTCTCAGC
CCTCACGACCGTGCGCGTGCAAGTGTCGGACATCAACGACAACCCTCCCCAGTGCCCACA
ATCTTCCTATGATGTTTACGTGGAGGAGAATAACCTCCCTGGTGCTCCGATTCTGAACCT
AAGCGTCTGGGACCCCGACGCCCCGCAGAATGCTCGCCTTTCCTTCTCTCTCTTGGAGCA
AGGAGCTGAAAGTGGGCTAGTGGGTCGCTATTTCACGATAAATCGTGACAGTGGCGTAGT
GTCATCCTTAGTGCCCCTGGACTATGAGGATCGGCGGGAGTTCGAATTAACAGCTCATAT
CAGCGATGGGGGCACTCCAGTCCTGGCCACCAACATCAGCGTGAACATATTTGTCACTGA
TCGCAACGACAACGCCCCCCAGGTCCTATACCCCCGGCCTGGCCAGAGCTCAGTGGAGAT
GCTGCCTCGAGGTACGGCTGCCGGTCATGTGGTCACGCGGGTGGTAGGCTGGGACCCGGA
TGCAGGACACAACGCCTGGCTCTCCTACAGCCTCTTGGGTGCCCCCAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               121-240, + strand, RNAz p=0.538687

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               121-240, + strand, RNAz p=0.538687

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               2-588, gnl|bosTau2|chr7 (35306927-35307513)
               

               
               2-588, gnl|Hg17|chr5 (140837125-140837711)
               

               
               2-588, gnl|Mm7|chr18 (38184006-38184592)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-588, gnl|bosTau2|chr7 (35306927-35307513)
               

               
               2-588, gnl|Hg17|chr5 (140837125-140837711)
               

               
               2-588, gnl|Mm7|chr18 (38184006-38184592)

	2-588, gnl\|bosTau2\|chr7 (35306927-35307513)
	2-588, gnl\|Hg17\|chr5 (140837125-140837711)
	2-588, gnl\|Mm7\|chr18 (38184006-38184592)