Ss1.1-Pig1-108G13.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGCCCCCGTGACCCCCTCTCCAAGTGCTTAGTTTACATCCAGGCTGAAGCCAGAGAACAA GGAAAGGGGGAGGGTAAAGTCCGCGGGAGGGGAGCTAGAAGGCCCCCTTCAAGTAGCTCA GGCCCGGCAGCTTGTGCGGGGCTTGTGGAAGAGGCCTCTCACGGAGGCGAAGGAACTCGG GGAGCAAACCCCAGCACGTGCAGGGCGTGAGGGTCTGAGGATGGAGGCCACCCGGGTCAC CTGCTCCCACTCCAACCATGCCCACGGGCAGAGCGCACCGACTCTTTCTGTCCAGACCTC CGCAAAAAGGCCGCCCCCGGGGAGGGCATCTTCACCCCGTGTCCCCGGGACCCGCCCGCT GGCGCCGCCTCACTCCTCCCAGGGGCTCATGTCTGTGTCGATGGCCACGCAGTTGTAGGC CGCGTAGCGGAGCTTCTCCTCACACACCTTGGCACTGGCGTAGTGCGGCAGGAAGAGGGT GCTGGAGCAGGTGGAAGACTCGGGCAGCGCGTCCGTGGTCTCGTAGCCTAGCTTGTCAGG GTAGATGTAGATGCGCGCAGGCAGGCGGCTGCGGCCCGTGACAAAGCGCAGGAAGCGGCT CCGGTCCTCGTTGGTAAGTTGTTCAGCGCCTCCCAGAAATACTGCACCCGAGTGTCAGAC GGCTCAAAGTCCTCAAACCTGGTGAGCTTGCGCAGAGCATCCACAGTGACCTCTGGGTCC CCGCACACCTTCTTCTCCAATTCTTGCCAGGTCAGCAAGTCCAGCACAGCCTGTGGCACC ACCTTCAGCAGGCCTGCCTGCATGGCTGCCACCTGCTCCTTGCTCTCCTCTAGCCGCGCC TTCTGCACCAGTTGGACGAAACGGGACCGGTCCTCATATCCCACCACGATGCCTGCACCC CCGGGGACCAGCTCCACCACCTGCTGGTCACTCAGCACAGTGGTGAATGTTAGCTCCTTC CCAAATTTGAATTCAAATGTCTCCTTGTCCATTCCTTCCATCACCTCCAGGAGCTTCACC AGCACGGAGTCCACGGCTGGGAAGTCCTTGCTCCAGCTCACCTCCTCCCCAGAGAGCTGC TTCCACACAAAACCAGGCAGCGCCAGGACCAGGAACTCCTTACCCCGAAGGGCAGCCCCC ATCAGCTGTCCGATCCACTCGTACTTGGCAAAGTCTCGGCAGGAGGGGTTGGGCACGTAC ATATCCCGGGCCTCACCCGTGCCATTGCCCTGGTTGGCCGTGCGTACAAAGAAGGGCAGA GGCACAGGGGTGTCTGCCGAACTAGGGCAGAGTTCCTCTGACATGTCTGCCAGGCTATCC CGGAAGCCGCCCCCTTGGTCAATGATGCCTTCTGCAATGAATTTACACTCCCACCATTGG TCGTAGCGCATGGGACGCCTGTAGTCCAGGGGCTTTTCGTACTTGTCAGCCAGTTAACCG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGCCCCCGTGACCCCCTCTCCAAGTGCTTAGTTTACATCCAGGCTGAAGCCAGAGAACAA GGAAAGGGGGAGGGTAAAGTCCGCGGGAGGGGAGCTAGAAGGCCCCCTTCAAGTAGCTCA GGCCCGGCAGCTTGTGCGGGGCTTGTGGAAGAGGCCTCTCACGGAGGCGAAGGAACTCGG GGAGCAAACCCCAGCACGTGCAGGGCGTGAGGGTCTGAGGATGGAGGCCACCCGGGTCAC CTGCTCCCACTCCAACCATGCCCACGGGCAGAGCGCACCGACTCTTTCTGTCCAGACCTC CGCAAAAAGGCCGCCCCCGGGGAGGGCATCTTCACCCCGTGTCCCCGGGACCCGCCCGCT GGCGCCGCCTCACTCCTCCCAGGGGCTCATGTCTGTGTCGATGGCCACGCAGTTGTAGGC CGCGTAGCGGAGCTTCTCCTCACACACCTTGGCACTGGCGTAGTGCGGCAGGAAGAGGGT GCTGGAGCAGGTGGAAGACTCGGGCAGCGCGTCCGTGGTCTCGTAGCCTAGCTTGTCAGG GTAGATGTAGATGCGCGCAGGCAGGCGGCTGCGGCCCGTGACAAAGCGCAGGAAGCGGCT CCGGTCCTCGTTGGTAAGTTGTTCAGCGCCTCCCAGAAATACTGCACCCGAGTGTCAGAC GGCTCAAAGTCCTCAAACCTGGTGAGCTTGCGCAGAGCATCCACAGTGACCTCTGGGTCC CCGCACACCTTCTTCTCCAATTCTTGCCAGGTCAGCAAGTCCAGCACAGCCTGTGGCACC ACCTTCAGCAGGCCTGCCTGCATGGCTGCCACCTGCTCCTTGCTCTCCTCTAGCCGCGCC TTCTGCACCAGTTGGACGAAACGGGACCGGTCCTCATATCCCACCACGATGCCTGCACCC CCGGGGACCAGCTCCACCACCTGCTGGTCACTCAGCACAGTGGTGAATGTTAGCTCCTTC CCAAATTTGAATTCAAATGTCTCCTTGTCCATTCCTTCCATCACCTCCAGGAGCTTCACC AGCACGGAGTCCACGGCTGGGAAGTCCTTGCTCCAGCTCACCTCCTCCCCAGAGAGCTGC TTCCACACAAAACCAGGCAGCGCCAGGACCAGGAACTCCTTACCCCGAAGGGCAGCCCCC ATCAGCTGTCCGATCCACTCGTACTTGGCAAAGTCTCGGCAGGAGGGGTTGGGCACGTAC ATATCCCGGGCCTCACCCGTGCCATTGCCCTGGTTGGCCGTGCGTACAAAGAAGGGCAGA GGCACAGGGGTGTCTGCCGAACTAGGGCAGAGTTCCTCTGACATGTCTGCCAGGCTATCC CGGAAGCCGCCCCCTTGGTCAATGATGCCTTCTGCAATGAATTTACACTCCCACCATTGG TCGTAGCGCATGGGACGCCTGTAGTCCAGGGGCTTTTCGTACTTGTCAGCCAGTTAACCG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 76-228, - strand, RNAz p=0.939324 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 76-228, - strand, RNAz p=0.939324 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 5' of AK056873, - |
| Aligned organism(s): 28 entry(ies) | More info |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
| 76-300, gnl|bosTau2|chr3 (68321357-68321589) | |
| 76-300, gnl|Hg17|chr1 (45137929-45138165) | |
| 76-300, gnl|Mm7|chr4 (116380108-116379880) | |
| 354-457, gnl|bosTau2|chr3 (68321678-68321781) | |
| 354-457, gnl|Hg17|chr1 (45138241-45138344) | |
| 354-457, gnl|Mm7|chr4 (116379813-116379718) | |
| 811-1020, gnl|bosTau2|chr3 (68322884-68323093) | |
| 811-1020, gnl|Hg17|chr1 (45139363-45139572) | |
| 811-1020, gnl|Mm7|chr4 (116378763-116378554) | |
| 1108-1232, gnl|bosTau2|chr3 (68324227-68324351) | |
| 1108-1232, gnl|canFam2|chr15 (18329645-18329520) | |
| 1108-1232, gnl|danRer3|chr2 (17798919-17798798) | |
| 1108-1232, gnl|dasNov1|scaffold_72027 (2211-2085) | |
| 1108-1232, gnl|echTel1|scaffold_299536 (7721-7596) | |
| 1108-1232, gnl|fr1|chrUn (246642069-246642206) | |
| 1108-1232, gnl|galGal2|chr8 (21182991-21183101) | |
| 1108-1232, gnl|hg17|chr1 (45140742-45140867) | |
| 1108-1232, gnl|Hg17|chr1 (45140760-45140884) | |
| 1108-1232, gnl|loxAfr1|scaffold_22711 (49765-49640) | |
| 1108-1232, gnl|mm7|chr4 (116377177-116377052) | |
| 1108-1232, gnl|Mm7|chr4 (116377157-116377033) | |
| 1108-1232, gnl|monDom2|scaffold_70 (7813548-7813423) | |
| 1108-1232, gnl|oryCun1|scaffold_164836 (4214-4089) | |
| 1108-1232, gnl|panTro1|chr1_random (65531804-65531679) | |
| 1108-1232, gnl|rheMac2|chr1 (47934979-47935104) | |
| 1108-1232, gnl|rn3|chr5 (137311967-137311842) | |
| 1108-1232, gnl|tetNig1|chrUn_random (17137757-17137646) | |
| 1108-1232, gnl|xenTro1|scaffold_1 (7438472-7438583) |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 76-300, gnl|bosTau2|chr3 (68321357-68321589) | |
| 76-300, gnl|Hg17|chr1 (45137929-45138165) | |
| 76-300, gnl|Mm7|chr4 (116380108-116379880) | |
| 354-457, gnl|bosTau2|chr3 (68321678-68321781) | |
| 354-457, gnl|Hg17|chr1 (45138241-45138344) | |
| 354-457, gnl|Mm7|chr4 (116379813-116379718) | |
| 811-1020, gnl|bosTau2|chr3 (68322884-68323093) | |
| 811-1020, gnl|Hg17|chr1 (45139363-45139572) | |
| 811-1020, gnl|Mm7|chr4 (116378763-116378554) | |
| 1108-1232, gnl|bosTau2|chr3 (68324227-68324351) | |
| 1108-1232, gnl|canFam2|chr15 (18329645-18329520) | |
| 1108-1232, gnl|danRer3|chr2 (17798919-17798798) | |
| 1108-1232, gnl|dasNov1|scaffold_72027 (2211-2085) | |
| 1108-1232, gnl|echTel1|scaffold_299536 (7721-7596) | |
| 1108-1232, gnl|fr1|chrUn (246642069-246642206) | |
| 1108-1232, gnl|galGal2|chr8 (21182991-21183101) | |
| 1108-1232, gnl|hg17|chr1 (45140742-45140867) | |
| 1108-1232, gnl|Hg17|chr1 (45140760-45140884) | |
| 1108-1232, gnl|loxAfr1|scaffold_22711 (49765-49640) | |
| 1108-1232, gnl|mm7|chr4 (116377177-116377052) | |
| 1108-1232, gnl|Mm7|chr4 (116377157-116377033) | |
| 1108-1232, gnl|monDom2|scaffold_70 (7813548-7813423) | |
| 1108-1232, gnl|oryCun1|scaffold_164836 (4214-4089) | |
| 1108-1232, gnl|panTro1|chr1_random (65531804-65531679) | |
| 1108-1232, gnl|rheMac2|chr1 (47934979-47935104) | |
| 1108-1232, gnl|rn3|chr5 (137311967-137311842) | |
| 1108-1232, gnl|tetNig1|chrUn_random (17137757-17137646) | |
| 1108-1232, gnl|xenTro1|scaffold_1 (7438472-7438583) |