Ss1.1-Pig1-109I12.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCGGGAGGAGCCGAAAGGATCTCTTCACCCAGACTTCTGGCCAGGGCTTTCTACACCACC TGCCAAGACTAGCAGGCCCACCCCTGGAAGCAGAGGTCCCGGCAACGGCTCCAGGAGCGC TACTACCAGGCTGTCTTTCTGGTCATTCTTAAGAGAAAAATCGAGATGTCCAAGGAGAGG GGGCTGATAAGCCCCAGTGATTTTGCCCAGCTGCAAAAATACATGGAATACTCCACCAAA AAGGTCAGTGATGTCCTAAAGCTCTTTGAGGATGGTGAAATGGCTGAATATCTCCAAGGA GATGCCATTGGGTACGAGGGATTCCAGCAATTCCTGAAAATCTATCTGGAAGTGGATAGT GTTCCTAGTCACCTAAGCCTGGCACTGTTTCAATCCTTCCAGACTAGTTACTGCTCAGAA GAGACTGTAAAAAGAGATGTGGTGTGTCTCAGTGATGTCTCCTGCTACTTCTCCCTTCTG GAGGGCGGCCGGCCAGAAGACAAGCTAGAGTTCACCTTCAAGCTGTACGACACGGACAGA AATGGGATCCTGGACAGCTCAGAAGTGGACAGAATCATCATACAGATGATGCGAATGGCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCGGGAGGAGCCGAAAGGATCTCTTCACCCAGACTTCTGGCCAGGGCTTTCTACACCACC TGCCAAGACTAGCAGGCCCACCCCTGGAAGCAGAGGTCCCGGCAACGGCTCCAGGAGCGC TACTACCAGGCTGTCTTTCTGGTCATTCTTAAGAGAAAAATCGAGATGTCCAAGGAGAGG GGGCTGATAAGCCCCAGTGATTTTGCCCAGCTGCAAAAATACATGGAATACTCCACCAAA AAGGTCAGTGATGTCCTAAAGCTCTTTGAGGATGGTGAAATGGCTGAATATCTCCAAGGA GATGCCATTGGGTACGAGGGATTCCAGCAATTCCTGAAAATCTATCTGGAAGTGGATAGT GTTCCTAGTCACCTAAGCCTGGCACTGTTTCAATCCTTCCAGACTAGTTACTGCTCAGAA GAGACTGTAAAAAGAGATGTGGTGTGTCTCAGTGATGTCTCCTGCTACTTCTCCCTTCTG GAGGGCGGCCGGCCAGAAGACAAGCTAGAGTTCACCTTCAAGCTGTACGACACGGACAGA AATGGGATCCTGGACAGCTCAGAAGTGGACAGAATCATCATACAGATGATGCGAATGGCT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 4 entry(ies) | More info |
| Predicted RNA structure(s): 4 entry(ies) | Help | Less info |
| 81-199, + strand, RNAz p=0.755756 | |
| 81-199, - strand, RNAz p=0.755756 | |
| 81-181, + strand, RNAz p=0.844879 | |
| 81-181, - strand, RNAz p=0.844879 |
| Predicted RNA structure(s): 4 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 81-199, + strand, RNAz p=0.755756 | |
| 81-199, - strand, RNAz p=0.755756 | |
| 81-181, + strand, RNAz p=0.844879 | |
| 81-181, - strand, RNAz p=0.844879 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 5' of NM_201444, + |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 81-229, gnl|bosTau2|chr5 (33665207-33665065) | |
| 81-229, gnl|canFam2|chr10 (3256989-3257160) | |
| 81-229, gnl|echTel1|scaffold_300644 (13755-13922) | |
| 81-229, gnl|fr1|chrUn (262268733-262268887) | |
| 81-229, gnl|hg17|chr12 (54616401-54616576) | |
| 81-229, gnl|Hg17|chr12 (54616479-54616618) | |
| 81-229, gnl|loxAfr1|scaffold_4766 (91708-91532) | |
| 81-229, gnl|mm7|chr10 (128238958-128238821) | |
| 81-229, gnl|Mm7|chr10 (128238907-128238777) | |
| 81-229, gnl|panTro1|chr10 (55845816-55845991) | |
| 81-229, gnl|rheMac2|chr11 (52988247-52988422) | |
| 81-229, gnl|rn3|chr7 (2037558-2037415) | |
| 304-443, gnl|bosTau2|chr5 (33664246-33664107) | |
| 304-443, gnl|canFam2|chr10 (3258225-3258340) | |
| 304-443, gnl|echTel1|scaffold_300644 (14759-14874) | |
| 304-443, gnl|fr1|chrUn (262270033-262270138) | |
| 304-443, gnl|hg17|chr12 (54617444-54617559) | |
| 304-443, gnl|Hg17|chr12 (54617459-54617601) | |
| 304-443, gnl|loxAfr1|scaffold_4766 (90445-90330) | |
| 304-443, gnl|mm7|chr10 (128238061-128237946) | |
| 304-443, gnl|Mm7|chr10 (128238044-128237902) | |
| 304-443, gnl|panTro1|chr10 (55846859-55846974) | |
| 304-443, gnl|rheMac2|chr11 (52989244-52989359) | |
| 304-443, gnl|rn3|chr7 (2036313-2036198) | |
| 304-443, gnl|tetNig1|chr9 (8822533-8822615) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 81-229, gnl|bosTau2|chr5 (33665207-33665065) | |
| 81-229, gnl|canFam2|chr10 (3256989-3257160) | |
| 81-229, gnl|echTel1|scaffold_300644 (13755-13922) | |
| 81-229, gnl|fr1|chrUn (262268733-262268887) | |
| 81-229, gnl|hg17|chr12 (54616401-54616576) | |
| 81-229, gnl|Hg17|chr12 (54616479-54616618) | |
| 81-229, gnl|loxAfr1|scaffold_4766 (91708-91532) | |
| 81-229, gnl|mm7|chr10 (128238958-128238821) | |
| 81-229, gnl|Mm7|chr10 (128238907-128238777) | |
| 81-229, gnl|panTro1|chr10 (55845816-55845991) | |
| 81-229, gnl|rheMac2|chr11 (52988247-52988422) | |
| 81-229, gnl|rn3|chr7 (2037558-2037415) | |
| 304-443, gnl|bosTau2|chr5 (33664246-33664107) | |
| 304-443, gnl|canFam2|chr10 (3258225-3258340) | |
| 304-443, gnl|echTel1|scaffold_300644 (14759-14874) | |
| 304-443, gnl|fr1|chrUn (262270033-262270138) | |
| 304-443, gnl|hg17|chr12 (54617444-54617559) | |
| 304-443, gnl|Hg17|chr12 (54617459-54617601) | |
| 304-443, gnl|loxAfr1|scaffold_4766 (90445-90330) | |
| 304-443, gnl|mm7|chr10 (128238061-128237946) | |
| 304-443, gnl|Mm7|chr10 (128238044-128237902) | |
| 304-443, gnl|panTro1|chr10 (55846859-55846974) | |
| 304-443, gnl|rheMac2|chr11 (52989244-52989359) | |
| 304-443, gnl|rn3|chr7 (2036313-2036198) | |
| 304-443, gnl|tetNig1|chr9 (8822533-8822615) |