Non-Coding RNA Search

Ss1.1-Pig1-10I08.5

Sequence:


               
               GAACCCCTTCGCAGCACTTGAGTTGGAAAGAGAAGTCTAAAGAGTCGTGTTGTATTGTTA
ACTGTTCCATGTTTTTTCTCATTAACAGTCAGTTTGAGAATAAAAAGGAAAAAAATACAC
TGCTGCTATTGTTACTAGTTTCACATCAAGAGGAAAGCTTTACTGTGTGGTCAAGAATGA
AGTCTGATTTCCATGTCATGGAGAGCATGTTTTTTTCATAGGAATGGTGATGTCGGTCAC
CTTCGACCTAGTAGTTGGTCACAGGAGCCCTCCTTGCCCCCATATTCTTGGGACTGTGCA
GTTTCCCATCATGCCTGATATGGGACAGGTGATTCTTTTTTTTCTGGATTACATGATGGC
AAAAGGTCAAATTTGGCAGAAAATACAGACTTGAAAGTATATAGTCAGCTCTTGTAGTAA
TCATTTCTTTACAATTCTCCTGTAAGTAAAGCTTCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAACCCCTTCGCAGCACTTGAGTTGGAAAGAGAAGTCTAAAGAGTCGTGTTGTATTGTTA
ACTGTTCCATGTTTTTTCTCATTAACAGTCAGTTTGAGAATAAAAAGGAAAAAAATACAC
TGCTGCTATTGTTACTAGTTTCACATCAAGAGGAAAGCTTTACTGTGTGGTCAAGAATGA
AGTCTGATTTCCATGTCATGGAGAGCATGTTTTTTTCATAGGAATGGTGATGTCGGTCAC
CTTCGACCTAGTAGTTGGTCACAGGAGCCCTCCTTGCCCCCATATTCTTGGGACTGTGCA
GTTTCCCATCATGCCTGATATGGGACAGGTGATTCTTTTTTTTCTGGATTACATGATGGC
AAAAGGTCAAATTTGGCAGAAAATACAGACTTGAAAGTATATAGTCAGCTCTTGTAGTAA
TCATTTCTTTACAATTCTCCTGTAAGTAAAGCTTCA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               205-318, - strand, RNAz p=0.983834

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               205-318, - strand, RNAz p=0.983834

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               12-454, gnl|bosTau2|chr1 (68932982-68932539)
               

               
               12-454, gnl|Hg17|chr3 (162285280-162284857)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               12-454, gnl|bosTau2|chr1 (68932982-68932539)
               

               
               12-454, gnl|Hg17|chr3 (162285280-162284857)

	12-454, gnl\|bosTau2\|chr1 (68932982-68932539)
	12-454, gnl\|Hg17\|chr3 (162285280-162284857)