Ss1.1-Pig1-117K10.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ACACATTACGCCAGAGCAAGATGGCCGACGTGGCGGCCACTGCCGGGGCCGGGGCCTCCG GAACGAGATCAGGAAGTAAACAGTCCACTAACCCTGCTGATAACTACCATCTGGCCCGGA GGCGAACTCTGCAAGTGGTTGTGAGCTCCCTGTTAACAGAGGCAGGGTTTGAGAGCGCTG AGAAAGCATCTGTGGAAACACTGACAGAGATGCTGCAGAGCTACATTTCAGAAATTGGGA GGAGTGCCAAGTCTTACTGTGAGCACACAGCCAGGACCCAGCCCACACTGTCAGACATTG TGGTCACCCTTGTCGAGATGGGTTTCAATGTGGACACGCTCCCTGCTTATGCAAAACGGT CTCAGAGGATGGTCATCACCGCCCCTCCAGTGACCAATCAGCCGGTGACCCCCAAGGCCC TCACTGCCGGACAGAACCGACCCCACCCGCCGCACATCCCCAGCCATTTTCCTGAGTTCC CCGATCCCCACACCTACATCAAAACTCCGACATACCGCGAGCCCGTGTCGGACTACCAGG TCCTTCGGGAGAAGGCTGCGTCCCAGAGGCGAGATGTGGAGCGGGCCCTCACCCGTTTCA TGGCCAAGACCGGCGAGACCCAGAGTCTTTTCAAAGATGACGTCAGCACGTTTCCACGTG AGAGTCCTCCCCCTCTGGATCCCGTCTTGTCCTTTGAGACCCTCACCTTGTCTCTCATCG TGGGAGGGAGAAACGAATAAGTTTTGTCCTTGTCTTGGCTGGAACTTTTCTTCAGATTTC TGGCTCCTTTTCCCAGGTCTTAAGGGCCTGTCCTCAGTGGATGACTCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ACACATTACGCCAGAGCAAGATGGCCGACGTGGCGGCCACTGCCGGGGCCGGGGCCTCCG GAACGAGATCAGGAAGTAAACAGTCCACTAACCCTGCTGATAACTACCATCTGGCCCGGA GGCGAACTCTGCAAGTGGTTGTGAGCTCCCTGTTAACAGAGGCAGGGTTTGAGAGCGCTG AGAAAGCATCTGTGGAAACACTGACAGAGATGCTGCAGAGCTACATTTCAGAAATTGGGA GGAGTGCCAAGTCTTACTGTGAGCACACAGCCAGGACCCAGCCCACACTGTCAGACATTG TGGTCACCCTTGTCGAGATGGGTTTCAATGTGGACACGCTCCCTGCTTATGCAAAACGGT CTCAGAGGATGGTCATCACCGCCCCTCCAGTGACCAATCAGCCGGTGACCCCCAAGGCCC TCACTGCCGGACAGAACCGACCCCACCCGCCGCACATCCCCAGCCATTTTCCTGAGTTCC CCGATCCCCACACCTACATCAAAACTCCGACATACCGCGAGCCCGTGTCGGACTACCAGG TCCTTCGGGAGAAGGCTGCGTCCCAGAGGCGAGATGTGGAGCGGGCCCTCACCCGTTTCA TGGCCAAGACCGGCGAGACCCAGAGTCTTTTCAAAGATGACGTCAGCACGTTTCCACGTG AGAGTCCTCCCCCTCTGGATCCCGTCTTGTCCTTTGAGACCCTCACCTTGTCTCTCATCG TGGGAGGGAGAAACGAATAAGTTTTGTCCTTGTCTTGGCTGGAACTTTTCTTCAGATTTC TGGCTCCTTTTCCCAGGTCTTAAGGGCCTGTCCTCAGTGGATGACTCC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 223-323, - strand, RNAz p=0.683213 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 223-323, - strand, RNAz p=0.683213 |
| Aligned organism(s): 41 entry(ies) | More info |
| Aligned organism(s): 41 entry(ies) | Help | Less info |
| 65-222, gnl|bosTau2|chr23 (13430096-13429939) | |
| 65-222, gnl|canFam2|chr12 (13694275-13694446) | |
| 65-222, gnl|danRer3|chr23 (45870385-45870559) | |
| 65-222, gnl|dasNov1|scaffold_13387 (5282-5454) | |
| 65-222, gnl|echTel1|scaffold_285733 (46014-46185) | |
| 65-222, gnl|fr1|chrUn (133762198-133762041) | |
| 65-222, gnl|galGal2|chr26 (3540625-3540796) | |
| 65-222, gnl|hg17|chr6 (42127067-42127238) | |
| 65-222, gnl|Hg17|chr6 (42127072-42127229) | |
| 65-222, gnl|loxAfr1|scaffold_23807 (13997-13826) | |
| 65-222, gnl|mm7|chr17 (45637988-45637817) | |
| 65-222, gnl|Mm7|chr17 (45637981-45637824) | |
| 65-222, gnl|monDom2|scaffold_42 (745312-745139) | |
| 65-222, gnl|oryCun1|scaffold_144137 (3167-2996) | |
| 65-222, gnl|panTro1|chr5 (42704680-42704851) | |
| 65-222, gnl|rheMac2|chr4 (41903636-41903807) | |
| 65-222, gnl|rn3|chr9 (8947920-8948091) | |
| 65-222, gnl|tetNig1|chr9 (10042906-10042766) | |
| 65-222, gnl|xenTro1|scaffold_19 (1194052-1193882) | |
| 223-323, gnl|bosTau2|chr23 (13427140-13427040) | |
| 223-323, gnl|canFam2|chr12 (13698421-13698529) | |
| 223-323, gnl|danRer3|chr23 (45871180-45871288) | |
| 223-323, gnl|dasNov1|scaffold_13387 (7588-7695) | |
| 223-323, gnl|echTel1|scaffold_285733 (47814-47922) | |
| 223-323, gnl|fr1|chrUn (133761898-133761790) | |
| 223-323, gnl|galGal2|chr26 (3541887-3541994) | |
| 223-323, gnl|hg17|chr6 (42131242-42131350) | |
| 223-323, gnl|Hg17|chr6 (42131247-42131347) | |
| 223-323, gnl|loxAfr1|scaffold_23807 (11330-11222) | |
| 223-323, gnl|mm7|chr17 (45635183-45635077) | |
| 223-323, gnl|Mm7|chr17 (45635178-45635078) | |
| 223-323, gnl|monDom2|scaffold_42 (740544-740436) | |
| 223-323, gnl|oryCun1|scaffold_207011 (2208-2319) | |
| 223-323, gnl|panTro1|chr5 (42708861-42708969) | |
| 223-323, gnl|rheMac2|chr4 (41908461-41908569) | |
| 223-323, gnl|rn3|chr9 (8950052-8950158) | |
| 223-323, gnl|tetNig1|chr9 (10042589-10042480) | |
| 223-323, gnl|xenTro1|scaffold_19 (1193380-1193272) | |
| 509-828, gnl|bosTau2|chr23 (13422328-13422004) | |
| 509-828, gnl|Hg17|chr6 (42142027-42142356) | |
| 509-828, gnl|Mm7|chr17 (45631030-45630707) |
| Aligned organism(s): 41 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 65-222, gnl|bosTau2|chr23 (13430096-13429939) | |
| 65-222, gnl|canFam2|chr12 (13694275-13694446) | |
| 65-222, gnl|danRer3|chr23 (45870385-45870559) | |
| 65-222, gnl|dasNov1|scaffold_13387 (5282-5454) | |
| 65-222, gnl|echTel1|scaffold_285733 (46014-46185) | |
| 65-222, gnl|fr1|chrUn (133762198-133762041) | |
| 65-222, gnl|galGal2|chr26 (3540625-3540796) | |
| 65-222, gnl|hg17|chr6 (42127067-42127238) | |
| 65-222, gnl|Hg17|chr6 (42127072-42127229) | |
| 65-222, gnl|loxAfr1|scaffold_23807 (13997-13826) | |
| 65-222, gnl|mm7|chr17 (45637988-45637817) | |
| 65-222, gnl|Mm7|chr17 (45637981-45637824) | |
| 65-222, gnl|monDom2|scaffold_42 (745312-745139) | |
| 65-222, gnl|oryCun1|scaffold_144137 (3167-2996) | |
| 65-222, gnl|panTro1|chr5 (42704680-42704851) | |
| 65-222, gnl|rheMac2|chr4 (41903636-41903807) | |
| 65-222, gnl|rn3|chr9 (8947920-8948091) | |
| 65-222, gnl|tetNig1|chr9 (10042906-10042766) | |
| 65-222, gnl|xenTro1|scaffold_19 (1194052-1193882) | |
| 223-323, gnl|bosTau2|chr23 (13427140-13427040) | |
| 223-323, gnl|canFam2|chr12 (13698421-13698529) | |
| 223-323, gnl|danRer3|chr23 (45871180-45871288) | |
| 223-323, gnl|dasNov1|scaffold_13387 (7588-7695) | |
| 223-323, gnl|echTel1|scaffold_285733 (47814-47922) | |
| 223-323, gnl|fr1|chrUn (133761898-133761790) | |
| 223-323, gnl|galGal2|chr26 (3541887-3541994) | |
| 223-323, gnl|hg17|chr6 (42131242-42131350) | |
| 223-323, gnl|Hg17|chr6 (42131247-42131347) | |
| 223-323, gnl|loxAfr1|scaffold_23807 (11330-11222) | |
| 223-323, gnl|mm7|chr17 (45635183-45635077) | |
| 223-323, gnl|Mm7|chr17 (45635178-45635078) | |
| 223-323, gnl|monDom2|scaffold_42 (740544-740436) | |
| 223-323, gnl|oryCun1|scaffold_207011 (2208-2319) | |
| 223-323, gnl|panTro1|chr5 (42708861-42708969) | |
| 223-323, gnl|rheMac2|chr4 (41908461-41908569) | |
| 223-323, gnl|rn3|chr9 (8950052-8950158) | |
| 223-323, gnl|tetNig1|chr9 (10042589-10042480) | |
| 223-323, gnl|xenTro1|scaffold_19 (1193380-1193272) | |
| 509-828, gnl|bosTau2|chr23 (13422328-13422004) | |
| 509-828, gnl|Hg17|chr6 (42142027-42142356) | |
| 509-828, gnl|Mm7|chr17 (45631030-45630707) |