Ss1.1-Pig1-120N11.5
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TTCCCGGGGAATCGTCGACCCCGCGTCCGGCTGTGCCTGCCTGGACGGAGCCCCCGCTGG
CGGCAACCCAGGTTCCTACTTGCAACACAGGTCTCACGTCATGTCATAGAAACGCTGCAC
ACTGTTACCGCCACAGAACACTCCCTGGGCTGGGCTGGGCTGGGCCGGGTCCTATTTCTC
CTCCAAGCTGCTCCCCAGTGGCCCTAGGTCCTCTGAAAGGAGTGGGAACCCGTAAACGAG
CTTCCTTCCTGCTCACGTTGGGTGGAGGGCCTGGCAGGGGGTCAGCCCTTTACAAAACAT
GGCTGGGCTACTGCAGGGGCCCCAAAGCTCCAAGTTTACGGCAAAGTGGTCTTTGACTTG
CTGCTGGATCTTTGGTGGCTGGCCTGGTGTCTGGCCTATCCAAGGGCCTGATGAGTGTTT
GCCGAATGCGGGCCGAAGGGCTGAGTGGTGGACCCTGCTTGAGTTGGCTCCCCGGGTAAC
CCCATCACCGATGGGTTTGATTCTCTTCCATCTTCCCCCTCCTCCCTCGGCCCGACTTCT
CCTCCAACCTGGCTCCTTCCCTGCAGACGGAGCTGTCACTGCAAAAGGAGCAGCTGCAGC
TCAAGATCATTGAGATCGAGGATGAAGCTGAGAAGTGGCAGAAGGAGAAGGACCGCATCA
AGGTCAGCAGCCCCCAGGGCTCCCCCACCCCCCGACCTGAGGAGGCAGGCCTGGGCTCCT
GCTTTGGGCCTCAGGCTACCCTTACATCCCACCCTTGTTTCTTGGGGGGCTCTCCTACCC
CCTCTGGCATTTCCACCAATTCCCCTTTTAAGTCTGGGCCACGCGTCCAGGTGGGATGTT
ACCCATCCCTTAATGCTCATTTTATATCATCCCATCATATAAAGACCCTGGACCAATTTG
TCCTCCAGTGTGTCTTCCAATGTCCCCCAATATCTGTTTTGCTCCCCAGCTATCCAGCCA
CCCCATGCACACCATGTTCCCTCTAGTTGTGCCAGTGTGGCCAGATGT
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Blue-coloured subsequences are predicted RNA structures by RNAz
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TTCCCGGGGAATCGTCGACCCCGCGTCCGGCTGTGCCTGCCTGGACGGAGCCCCCGCTGG
CGGCAACCCAGGTTCCTACTTGCAACACAGGTCTCACGTCATGTCATAGAAACGCTGCAC
ACTGTTACCGCCACAGAACACTCCCTGGGCTGGGCTGGGCTGGGCCGGGTCCTATTTCTC
CTCCAAGCTGCTCCCCAGTGGCCCTAGGTCCTCTGAAAGGAGTGGGAACCCGTAAACGAG
CTTCCTTCCTGCTCACGTTGGGTGGAGGGCCTGGCAGGGGGTCAGCCCTTTACAAAACAT
GGCTGGGCTACTGCAGGGGCCCCAAAGCTCCAAGTTTACGGCAAAGTGGTCTTTGACTTG
CTGCTGGATCTTTGGTGGCTGGCCTGGTGTCTGGCCTATCCAAGGGCCTGATGAGTGTTT
GCCGAATGCGGGCCGAAGGGCTGAGTGGTGGACCCTGCTTGAGTTGGCTCCCCGGGTAAC
CCCATCACCGATGGGTTTGATTCTCTTCCATCTTCCCCCTCCTCCCTCGGCCCGACTTCT
CCTCCAACCTGGCTCCTTCCCTGCAGACGGAGCTGTCACTGCAAAAGGAGCAGCTGCAGC
TCAAGATCATTGAGATCGAGGATGAAGCTGAGAAGTGGCAGAAGGAGAAGGACCGCATCA
AGGTCAGCAGCCCCCAGGGCTCCCCCACCCCCCGACCTGAGGAGGCAGGCCTGGGCTCCT
GCTTTGGGCCTCAGGCTACCCTTACATCCCACCCTTGTTTCTTGGGGGGCTCTCCTACCC
CCTCTGGCATTTCCACCAATTCCCCTTTTAAGTCTGGGCCACGCGTCCAGGTGGGATGTT
ACCCATCCCTTAATGCTCATTTTATATCATCCCATCATATAAAGACCCTGGACCAATTTG
TCCTCCAGTGTGTCTTCCAATGTCCCCCAATATCTGTTTTGCTCCCCAGCTATCCAGCCA
CCCCATGCACACCATGTTCCCTCTAGTTGTGCCAGTGTGGCCAGATGT
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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30-459, gnl|bosTau2|chr15 (15810584-15811018) |
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30-459, gnl|Hg17|chr11 (119504935-119504481) |
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30-459, gnl|Mm7|chr9 (43253163-43253597) |
| |
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522-716, gnl|bosTau2|chr15 (15811043-15811243) |
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522-716, gnl|canFam2|chr5 (16871024-16870809) |
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522-716, gnl|dasNov1|scaffold_211271 (3258-3460) |
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522-716, gnl|galGal2|chr24 (3769008-3768788) |
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522-716, gnl|hg17|chr11 (119504211-119504428) |
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522-716, gnl|Hg17|chr11 (119504456-119504251) |
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522-716, gnl|mm7|chr9 (43253872-43253659) |
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522-716, gnl|Mm7|chr9 (43253623-43253788) |
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522-716, gnl|monDom2|scaffold_2 (117710239-117710027) |
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522-716, gnl|oryCun1|scaffold_176167 (25133-24977) |
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522-716, gnl|panTro1|chr9 (121525808-121526025) |
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522-716, gnl|rheMac2|chr14 (118534123-118534339) |
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522-716, gnl|rn3|chr8 (46330332-46330122) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
30-459, gnl|bosTau2|chr15 (15810584-15811018) |
|
30-459, gnl|Hg17|chr11 (119504935-119504481) |
|
30-459, gnl|Mm7|chr9 (43253163-43253597) |
| |
|
522-716, gnl|bosTau2|chr15 (15811043-15811243) |
|
522-716, gnl|canFam2|chr5 (16871024-16870809) |
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522-716, gnl|dasNov1|scaffold_211271 (3258-3460) |
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522-716, gnl|galGal2|chr24 (3769008-3768788) |
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522-716, gnl|hg17|chr11 (119504211-119504428) |
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522-716, gnl|Hg17|chr11 (119504456-119504251) |
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522-716, gnl|mm7|chr9 (43253872-43253659) |
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522-716, gnl|Mm7|chr9 (43253623-43253788) |
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522-716, gnl|monDom2|scaffold_2 (117710239-117710027) |
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522-716, gnl|oryCun1|scaffold_176167 (25133-24977) |
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522-716, gnl|panTro1|chr9 (121525808-121526025) |
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522-716, gnl|rheMac2|chr14 (118534123-118534339) |
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522-716, gnl|rn3|chr8 (46330332-46330122) |
