Ss1.1-Pig1-123I08.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGCCAAGGTTGCAATCAAGATCATAGATAAGACCCAGCTGGATGAAGAAACTTGAAGAAA TTTTCCGAGAAGTTCAAATTATGAAGATGCTTTGCCACCCCCATATTATCAGGCTGTACC AGGTTATGGAGACAGAACGGATGATTTATCTGGTGACAGAATATGCTAGTGGAGGGGAAA TATTTGACCACCTGGTGGCCCATGGCAGAATGGCAGAAAAGGAGGCCCGTCGGAAGTTCA AACAGATTGTTGCAGCCGTCTATTTTTGTCACTGTCGGAACATTGTTCATCGTGATCTAA AAGCTGAAAATTTGCTTTTAGACGCCAATCTGAATATCAAAATAGCAGATTTTGGCTTCA GTAACCTCTTCACTCCTGGGCAGCTGCTGAAGACCTGGTGTGGTAGCCCTCCCTATGCTG CACCCGAACTCTTTGAAGGAAAGGAATATGATGGGCCCAAAGTGGACATCTGGAGCCTTG GCGTTGTCCTCTATGTGCTGGTGTGTGGAGCCCTGCCATTTGATGGGAGCACACTGCAGA ATCTTCGGGCCCGGGTGTTGAGTGGAAAGTTCCGCATCCCATTTTTTATGTCCACAGAAT GTGAGCACTTGATCCGCCACATGCTGGTGTTGGACCCCAACAAGCGCCTCTCCATGGAGC AGATCTGCAAGCACAAGTGGATGAAGCTAGGGGATGCTGATCCCAACTTTGACAGGTTAA TAGCTGAATGCCAGCAGCTGAAGGAAGAAAGACAGATGGACCCCCTAAATGAGGATGTCC TCTTGGCCATGGAGGACATGGGACTGGACAAAGAGCGGACACTACAGTCATTAAGATCAG ATGCCTATGATCACTATAGTGCAATCTACAGCCTGCTCTGTGATCGGCATAAGAGACATA AAACCCTGCGTGTCGGAGTACCTCCTAGCATGCCCCGAGCCATGGCCTTTCAAGCACCAG TCAACATCCAGGCGGAGCAGGCTGGCACCACGATGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGCCAAGGTTGCAATCAAGATCATAGATAAGACCCAGCTGGATGAAGAAACTTGAAGAAA TTTTCCGAGAAGTTCAAATTATGAAGATGCTTTGCCACCCCCATATTATCAGGCTGTACC AGGTTATGGAGACAGAACGGATGATTTATCTGGTGACAGAATATGCTAGTGGAGGGGAAA TATTTGACCACCTGGTGGCCCATGGCAGAATGGCAGAAAAGGAGGCCCGTCGGAAGTTCA AACAGATTGTTGCAGCCGTCTATTTTTGTCACTGTCGGAACATTGTTCATCGTGATCTAA AAGCTGAAAATTTGCTTTTAGACGCCAATCTGAATATCAAAATAGCAGATTTTGGCTTCA GTAACCTCTTCACTCCTGGGCAGCTGCTGAAGACCTGGTGTGGTAGCCCTCCCTATGCTG CACCCGAACTCTTTGAAGGAAAGGAATATGATGGGCCCAAAGTGGACATCTGGAGCCTTG GCGTTGTCCTCTATGTGCTGGTGTGTGGAGCCCTGCCATTTGATGGGAGCACACTGCAGA ATCTTCGGGCCCGGGTGTTGAGTGGAAAGTTCCGCATCCCATTTTTTATGTCCACAGAAT GTGAGCACTTGATCCGCCACATGCTGGTGTTGGACCCCAACAAGCGCCTCTCCATGGAGC AGATCTGCAAGCACAAGTGGATGAAGCTAGGGGATGCTGATCCCAACTTTGACAGGTTAA TAGCTGAATGCCAGCAGCTGAAGGAAGAAAGACAGATGGACCCCCTAAATGAGGATGTCC TCTTGGCCATGGAGGACATGGGACTGGACAAAGAGCGGACACTACAGTCATTAAGATCAG ATGCCTATGATCACTATAGTGCAATCTACAGCCTGCTCTGTGATCGGCATAAGAGACATA AAACCCTGCGTGTCGGAGTACCTCCTAGCATGCCCCGAGCCATGGCCTTTCAAGCACCAG TCAACATCCAGGCGGAGCAGGCTGGCACCACGATGA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 58 entry(ies) | More info |
| Aligned organism(s): 58 entry(ies) | Help | Less info |
| 6-124, gnl|bosTau2|chr15 (13062939-13063059) | |
| 6-124, gnl|Hg17|chr11 (116332992-116332872) | |
| 6-124, gnl|Mm7|chr9 (46081338-46081458) | |
| 186-348, gnl|bosTau2|chr15 (13099949-13100111) | |
| 186-348, gnl|canFam2|chr5 (19662271-19662100) | |
| 186-348, gnl|danRer3|chrUn (95449155-95449324) | |
| 186-348, gnl|dasNov1|scaffold_284089 (1289-1437) | |
| 186-348, gnl|echTel1|scaffold_253665 (1645-1474) | |
| 186-348, gnl|fr1|chrUn (14623024-14623190) | |
| 186-348, gnl|galGal2|chr24 (4837069-4837239) | |
| 186-348, gnl|hg17|chr11 (116303140-116303311) | |
| 186-348, gnl|Hg17|chr11 (116303307-116303145) | |
| 186-348, gnl|loxAfr1|scaffold_6637 (54637-54804) | |
| 186-348, gnl|mm7|chr9 (46113670-46113499) | |
| 186-348, gnl|Mm7|chr9 (46113501-46113663) | |
| 186-348, gnl|monDom2|scaffold_2 (122371957-122371787) | |
| 186-348, gnl|oryCun1|scaffold_17190 (2247-2076) | |
| 186-348, gnl|panTro1|chr9 (118304143-118304314) | |
| 186-348, gnl|rheMac2|chr14 (115326468-115326639) | |
| 186-348, gnl|rn3|chr8 (49139535-49139364) | |
| 186-348, gnl|tetNig1|chrUn_random (14877839-14878006) | |
| 186-348, gnl|xenTro1|scaffold_18 (1404706-1404535) | |
| 595-716, gnl|bosTau2|chr15 (13148939-13149060) | |
| 595-716, gnl|canFam2|chr5 (19708402-19708273) | |
| 595-716, gnl|danRer3|chrUn (95447893-95448022) | |
| 595-716, gnl|dasNov1|scaffold_83372 (1703-1832) | |
| 595-716, gnl|echTel1|scaffold_311472 (39900-40029) | |
| 595-716, gnl|fr1|chrUn (14622186-14622315) | |
| 595-716, gnl|galGal2|chr24 (4825231-4825360) | |
| 595-716, gnl|hg17|chr11 (116252846-116252975) | |
| 595-716, gnl|Hg17|chr11 (116252971-116252850) | |
| 595-716, gnl|loxAfr1|scaffold_14984 (19239-19110) | |
| 595-716, gnl|mm7|chr9 (46152410-46152281) | |
| 595-716, gnl|Mm7|chr9 (46152283-46152404) | |
| 595-716, gnl|monDom2|scaffold_2 (122443972-122443839) | |
| 595-716, gnl|oryCun1|scaffold_204329 (243-372) | |
| 595-716, gnl|panTro1|chr9 (118252865-118252994) | |
| 595-716, gnl|rheMac2|chr14 (115274872-115275001) | |
| 595-716, gnl|rn3|chrUn (13233578-13233453) | |
| 595-716, gnl|tetNig1|chrUn_random (14877035-14877164) | |
| 595-716, gnl|xenTro1|scaffold_18 (1416490-1416361) | |
| 826-975, gnl|bosTau2|chr15 (13149942-13150091) | |
| 826-975, gnl|canFam2|chr5 (19709427-19709263) | |
| 826-975, gnl|dasNov1|scaffold_261360 (3472-3308) | |
| 826-975, gnl|echTel1|scaffold_311472 (38889-39050) | |
| 826-975, gnl|fr1|chrUn (14620758-14620916) | |
| 826-975, gnl|galGal2|chr24 (4824501-4824665) | |
| 826-975, gnl|hg17|chr11 (116251788-116251952) | |
| 826-975, gnl|Hg17|chr11 (116251937-116251788) | |
| 826-975, gnl|loxAfr1|scaffold_14984 (20312-20151) | |
| 826-975, gnl|mm7|chr9 (46153438-46153274) | |
| 826-975, gnl|Mm7|chr9 (46153287-46153436) | |
| 826-975, gnl|monDom2|scaffold_2 (122444905-122444741) | |
| 826-975, gnl|panTro1|chr9 (118251807-118251971) | |
| 826-975, gnl|rheMac2|chr14 (115273805-115273969) | |
| 826-975, gnl|rn3|chrUn (13233830-13233683) | |
| 826-975, gnl|tetNig1|chrUn_random (14875908-14876041) | |
| 826-975, gnl|xenTro1|scaffold_18 (1418324-1418163) |
| Aligned organism(s): 58 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 6-124, gnl|bosTau2|chr15 (13062939-13063059) | |
| 6-124, gnl|Hg17|chr11 (116332992-116332872) | |
| 6-124, gnl|Mm7|chr9 (46081338-46081458) | |
| 186-348, gnl|bosTau2|chr15 (13099949-13100111) | |
| 186-348, gnl|canFam2|chr5 (19662271-19662100) | |
| 186-348, gnl|danRer3|chrUn (95449155-95449324) | |
| 186-348, gnl|dasNov1|scaffold_284089 (1289-1437) | |
| 186-348, gnl|echTel1|scaffold_253665 (1645-1474) | |
| 186-348, gnl|fr1|chrUn (14623024-14623190) | |
| 186-348, gnl|galGal2|chr24 (4837069-4837239) | |
| 186-348, gnl|hg17|chr11 (116303140-116303311) | |
| 186-348, gnl|Hg17|chr11 (116303307-116303145) | |
| 186-348, gnl|loxAfr1|scaffold_6637 (54637-54804) | |
| 186-348, gnl|mm7|chr9 (46113670-46113499) | |
| 186-348, gnl|Mm7|chr9 (46113501-46113663) | |
| 186-348, gnl|monDom2|scaffold_2 (122371957-122371787) | |
| 186-348, gnl|oryCun1|scaffold_17190 (2247-2076) | |
| 186-348, gnl|panTro1|chr9 (118304143-118304314) | |
| 186-348, gnl|rheMac2|chr14 (115326468-115326639) | |
| 186-348, gnl|rn3|chr8 (49139535-49139364) | |
| 186-348, gnl|tetNig1|chrUn_random (14877839-14878006) | |
| 186-348, gnl|xenTro1|scaffold_18 (1404706-1404535) | |
| 595-716, gnl|bosTau2|chr15 (13148939-13149060) | |
| 595-716, gnl|canFam2|chr5 (19708402-19708273) | |
| 595-716, gnl|danRer3|chrUn (95447893-95448022) | |
| 595-716, gnl|dasNov1|scaffold_83372 (1703-1832) | |
| 595-716, gnl|echTel1|scaffold_311472 (39900-40029) | |
| 595-716, gnl|fr1|chrUn (14622186-14622315) | |
| 595-716, gnl|galGal2|chr24 (4825231-4825360) | |
| 595-716, gnl|hg17|chr11 (116252846-116252975) | |
| 595-716, gnl|Hg17|chr11 (116252971-116252850) | |
| 595-716, gnl|loxAfr1|scaffold_14984 (19239-19110) | |
| 595-716, gnl|mm7|chr9 (46152410-46152281) | |
| 595-716, gnl|Mm7|chr9 (46152283-46152404) | |
| 595-716, gnl|monDom2|scaffold_2 (122443972-122443839) | |
| 595-716, gnl|oryCun1|scaffold_204329 (243-372) | |
| 595-716, gnl|panTro1|chr9 (118252865-118252994) | |
| 595-716, gnl|rheMac2|chr14 (115274872-115275001) | |
| 595-716, gnl|rn3|chrUn (13233578-13233453) | |
| 595-716, gnl|tetNig1|chrUn_random (14877035-14877164) | |
| 595-716, gnl|xenTro1|scaffold_18 (1416490-1416361) | |
| 826-975, gnl|bosTau2|chr15 (13149942-13150091) | |
| 826-975, gnl|canFam2|chr5 (19709427-19709263) | |
| 826-975, gnl|dasNov1|scaffold_261360 (3472-3308) | |
| 826-975, gnl|echTel1|scaffold_311472 (38889-39050) | |
| 826-975, gnl|fr1|chrUn (14620758-14620916) | |
| 826-975, gnl|galGal2|chr24 (4824501-4824665) | |
| 826-975, gnl|hg17|chr11 (116251788-116251952) | |
| 826-975, gnl|Hg17|chr11 (116251937-116251788) | |
| 826-975, gnl|loxAfr1|scaffold_14984 (20312-20151) | |
| 826-975, gnl|mm7|chr9 (46153438-46153274) | |
| 826-975, gnl|Mm7|chr9 (46153287-46153436) | |
| 826-975, gnl|monDom2|scaffold_2 (122444905-122444741) | |
| 826-975, gnl|panTro1|chr9 (118251807-118251971) | |
| 826-975, gnl|rheMac2|chr14 (115273805-115273969) | |
| 826-975, gnl|rn3|chrUn (13233830-13233683) | |
| 826-975, gnl|tetNig1|chrUn_random (14875908-14876041) | |
| 826-975, gnl|xenTro1|scaffold_18 (1418324-1418163) |