Ss1.1-Pig1-125F09.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCTTCACCTCCGCCGCCACCTCCAGCCTCCAGACCCCTTGGACCCACGGGGTTGGTTTTT CTGGTTTGCTCCTCCAGGGCAATTTGCGTAATTTTCTGAAGAACCTTCAAGAAGCTGAAC AGCCTGTTTTCAGACTTAGAGGGGAGGTCCATGGTTGTTTCTTGAAATCTGGCGCTGGAG ATGGGCACACAGGACCGACTGAGCCGGAGGCTGCAGGTGGCCGAGCCAGGTGTGGAGGGG GAGCCACATCTGCCCACAGGCCAGGAGCTGACCGAGGCCAACCGTTTCGCTTATGCCGCC CTCTGTGGCATCTCCCTGTCCCAGCTATTTCCAGAACCTGAGCAAAGATCCTTCTGCTCG GAGTTCGTGGCCGGTTTGGTGAAGTGGCTGGAGTTGTCTGAAGCCGTCTTGCCAACCATG ACTGCTTTTGCCAGCGGCCTGGGAGGCGAAGGAGCAGACATGTTTGCTCAGATTTTATTG AAGGACCCCATCCTGGAGGACAGCCCACTGCTGATCACTCAGGACCTTCTGAGCTTCTCA CTCAAGGATGGGCGCTATGACGCACGGGCCCGTGTCCTCATTTGCCGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCTTCACCTCCGCCGCCACCTCCAGCCTCCAGACCCCTTGGACCCACGGGGTTGGTTTTT CTGGTTTGCTCCTCCAGGGCAATTTGCGTAATTTTCTGAAGAACCTTCAAGAAGCTGAAC AGCCTGTTTTCAGACTTAGAGGGGAGGTCCATGGTTGTTTCTTGAAATCTGGCGCTGGAG ATGGGCACACAGGACCGACTGAGCCGGAGGCTGCAGGTGGCCGAGCCAGGTGTGGAGGGG GAGCCACATCTGCCCACAGGCCAGGAGCTGACCGAGGCCAACCGTTTCGCTTATGCCGCC CTCTGTGGCATCTCCCTGTCCCAGCTATTTCCAGAACCTGAGCAAAGATCCTTCTGCTCG GAGTTCGTGGCCGGTTTGGTGAAGTGGCTGGAGTTGTCTGAAGCCGTCTTGCCAACCATG ACTGCTTTTGCCAGCGGCCTGGGAGGCGAAGGAGCAGACATGTTTGCTCAGATTTTATTG AAGGACCCCATCCTGGAGGACAGCCCACTGCTGATCACTCAGGACCTTCTGAGCTTCTCA CTCAAGGATGGGCGCTATGACGCACGGGCCCGTGTCCTCATTTGCCGC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 346-464, + strand, RNAz p=0.695958 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 346-464, + strand, RNAz p=0.695958 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 3' of BC053600, + |
| Aligned organism(s): 28 entry(ies) | More info |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
| 15-172, gnl|bosTau2|chr2 (61669954-61669795) | |
| 15-172, gnl|canFam2|chr2 (81835315-81834974) | |
| 15-172, gnl|dasNov1|scaffold_99706 (2878-3202) | |
| 15-172, gnl|echTel1|scaffold_321807 (77571-77916) | |
| 15-172, gnl|hg17|chr1 (19858785-19859153) | |
| 15-172, gnl|Hg17|chr1 (19858978-19858825) | |
| 15-172, gnl|loxAfr1|scaffold_82371 (7503-7160) | |
| 15-172, gnl|mm7|chr4 (138362247-138361940) | |
| 15-172, gnl|Mm7|chr4 (138362052-138362206) | |
| 15-172, gnl|panTro1|chr1 (20151765-20152132) | |
| 15-172, gnl|rheMac2|chr1 (22443381-22443749) | |
| 15-172, gnl|rn3|chr5 (157818857-157818546) | |
| 346-523, gnl|bosTau2|chr2 (61655985-61655808) | |
| 346-523, gnl|canFam2|chr2 (81846262-81846054) | |
| 346-523, gnl|dasNov1|scaffold_5064 (52714-52923) | |
| 346-523, gnl|echTel1|scaffold_176114 (3260-3048) | |
| 346-523, gnl|galGal2|chr21 (4661940-4662133) | |
| 346-523, gnl|hg17|chr1 (19843099-19843307) | |
| 346-523, gnl|Hg17|chr1 (19843283-19843106) | |
| 346-523, gnl|loxAfr1|scaffold_21516 (34913-35121) | |
| 346-523, gnl|mm7|chr4 (138375021-138374817) | |
| 346-523, gnl|Mm7|chr4 (138374837-138375014) | |
| 346-523, gnl|monDom2|scaffold_90 (853774-853979) | |
| 346-523, gnl|oryCun1|scaffold_210942 (78490-78698) | |
| 346-523, gnl|panTro1|chr1 (20136131-20136339) | |
| 346-523, gnl|rheMac2|chr1 (22426230-22426439) | |
| 346-523, gnl|rn3|chr5 (157829558-157829355) | |
| 346-523, gnl|xenTro1|scaffold_888 (226140-225959) |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 15-172, gnl|bosTau2|chr2 (61669954-61669795) | |
| 15-172, gnl|canFam2|chr2 (81835315-81834974) | |
| 15-172, gnl|dasNov1|scaffold_99706 (2878-3202) | |
| 15-172, gnl|echTel1|scaffold_321807 (77571-77916) | |
| 15-172, gnl|hg17|chr1 (19858785-19859153) | |
| 15-172, gnl|Hg17|chr1 (19858978-19858825) | |
| 15-172, gnl|loxAfr1|scaffold_82371 (7503-7160) | |
| 15-172, gnl|mm7|chr4 (138362247-138361940) | |
| 15-172, gnl|Mm7|chr4 (138362052-138362206) | |
| 15-172, gnl|panTro1|chr1 (20151765-20152132) | |
| 15-172, gnl|rheMac2|chr1 (22443381-22443749) | |
| 15-172, gnl|rn3|chr5 (157818857-157818546) | |
| 346-523, gnl|bosTau2|chr2 (61655985-61655808) | |
| 346-523, gnl|canFam2|chr2 (81846262-81846054) | |
| 346-523, gnl|dasNov1|scaffold_5064 (52714-52923) | |
| 346-523, gnl|echTel1|scaffold_176114 (3260-3048) | |
| 346-523, gnl|galGal2|chr21 (4661940-4662133) | |
| 346-523, gnl|hg17|chr1 (19843099-19843307) | |
| 346-523, gnl|Hg17|chr1 (19843283-19843106) | |
| 346-523, gnl|loxAfr1|scaffold_21516 (34913-35121) | |
| 346-523, gnl|mm7|chr4 (138375021-138374817) | |
| 346-523, gnl|Mm7|chr4 (138374837-138375014) | |
| 346-523, gnl|monDom2|scaffold_90 (853774-853979) | |
| 346-523, gnl|oryCun1|scaffold_210942 (78490-78698) | |
| 346-523, gnl|panTro1|chr1 (20136131-20136339) | |
| 346-523, gnl|rheMac2|chr1 (22426230-22426439) | |
| 346-523, gnl|rn3|chr5 (157829558-157829355) | |
| 346-523, gnl|xenTro1|scaffold_888 (226140-225959) |