Non-Coding RNA Search

Ss1.1-Pig1-131B21.5

Sequence:


               
               CTTCTGTCTGGCTGACACTTGCCTCTTGCTGATGGACAAAAGGAAAGACCCTTCTTCTGT
TGATATCAAGAAAGTTCTATTAGAAATGAGGAAGTTTCGGATGGGACTGATCCAGACAGC
AGACCAGCTCCGTTTCTCCTACCTGGCTGTGATCGAGGGTGCCAAATTCATCATGGGAGA
CTCTTCAGTACAGGAGCAATGGAAGGAACTCTCCCACGAGGACCTGGAGCCCCCACCAGA
GCACGTCCCCCCGCCTCCTCGGCCTCCCAAACGAATCCTGGAGCCGCACAATGGGAAATG
CAAGGAGTTCTTCCCAAACCACCAGTGGGTAAAGGATGAGACTGAGGAGGATAAAGAAGA
TGGCCCTATCAAGGAAGAAACCAGAACCCCCTTAAACGTCTCCTGCAGCCTAGAAAGCGC
GAGTCAAGACACTGAAGTCAGAAGGCGGGTCGTGGGGGCAGGTTCTGCCCAGGGAGAGCC
ATCACCACCCAAGGAGGAGCAGGACCAGGCGTTGACTCCCTGGAAGCCCTTCCTGGTCAA
CATGTGCATGGCCACAGTCCTCACCGCTGGCGCGTACCTCTGCTACCGGGTATGTTTTCA
CTGACGGACGTGCTGGCCAGACCGCGTGTACAGAAAGCCCTGGCCACCAGCCCGGCGTTA
GCACTCAGAGCAGGAGGCTCTGAGCCAGTCTCAGAAGAAGCAGATCAAAGGTTTTCAAAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTCTGTCTGGCTGACACTTGCCTCTTGCTGATGGACAAAAGGAAAGACCCTTCTTCTGT
TGATATCAAGAAAGTTCTATTAGAAATGAGGAAGTTTCGGATGGGACTGATCCAGACAGC
AGACCAGCTCCGTTTCTCCTACCTGGCTGTGATCGAGGGTGCCAAATTCATCATGGGAGA
CTCTTCAGTACAGGAGCAATGGAAGGAACTCTCCCACGAGGACCTGGAGCCCCCACCAGA
GCACGTCCCCCCGCCTCCTCGGCCTCCCAAACGAATCCTGGAGCCGCACAATGGGAAATG
CAAGGAGTTCTTCCCAAACCACCAGTGGGTAAAGGATGAGACTGAGGAGGATAAAGAAGA
TGGCCCTATCAAGGAAGAAACCAGAACCCCCTTAAACGTCTCCTGCAGCCTAGAAAGCGC
GAGTCAAGACACTGAAGTCAGAAGGCGGGTCGTGGGGGCAGGTTCTGCCCAGGGAGAGCC
ATCACCACCCAAGGAGGAGCAGGACCAGGCGTTGACTCCCTGGAAGCCCTTCCTGGTCAA
CATGTGCATGGCCACAGTCCTCACCGCTGGCGCGTACCTCTGCTACCGGGTATGTTTTCA
CTGACGGACGTGCTGGCCAGACCGCGTGTACAGAAAGCCCTGGCCACCAGCCCGGCGTTA
GCACTCAGAGCAGGAGGCTCTGAGCCAGTCTCAGAAGAAGCAGATCAAAGGTTTTCAAAG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|190279|gb|AAA60158.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|190279|gb|AAA60158.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               25-194, gnl|bosTau2|chr13 (60082661-60082492)
               

               
               25-194, gnl|Hg17|chr20 (48629105-48629274)
               

               
               25-194, gnl|Mm7|chr2 (167767376-167767545)
               


               
               416-714, gnl|bosTau2|chr13 (60080223-60079927)
               

               
               416-714, gnl|Hg17|chr20 (48631207-48631533)
               

               
               416-714, gnl|Mm7|chr2 (167769077-167769381)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               25-194, gnl|bosTau2|chr13 (60082661-60082492)
               

               
               25-194, gnl|Hg17|chr20 (48629105-48629274)
               

               
               25-194, gnl|Mm7|chr2 (167767376-167767545)
               


               
               416-714, gnl|bosTau2|chr13 (60080223-60079927)
               

               
               416-714, gnl|Hg17|chr20 (48631207-48631533)
               

               
               416-714, gnl|Mm7|chr2 (167769077-167769381)

	25-194, gnl\|bosTau2\|chr13 (60082661-60082492)
	25-194, gnl\|Hg17\|chr20 (48629105-48629274)
	25-194, gnl\|Mm7\|chr2 (167767376-167767545)

	416-714, gnl\|bosTau2\|chr13 (60080223-60079927)
	416-714, gnl\|Hg17\|chr20 (48631207-48631533)
	416-714, gnl\|Mm7\|chr2 (167769077-167769381)