Ss1.1-Pig1-132H21.5
|
TTCCAATGAAGAGGCTGTGGCTACCAAAGGACAAAGGGGAGAAGCTAATTCCTGAAGTTG
AGAAGAATGTCTTCCAAGCAAGCCACCTCTCCATTTGCCTGTGCAGCTGATGGAGAGGAA
GCGATGACCCAAGATTTGACCTCAAGAGAAAAAGAAGAAGGCAGTGATCAACATGTGGCC
TCCCATCTGCCTCTGCATCCCATAATGCACAACAAACCTCACTCTGAGGAGCTACCAACA
CTTGTCAGTACCATTCAACAAGATGCTGACTGGGACAGCGTTCTGTCGTCTCAGCAAAGA
ATGGATTCAGAGAATAATAAGTTATGTTCCCTATATTCCTTCCGAAATACCTCTACCTCA
CCACATAAGCCTGACGAAGGGAGTCGGGACCGCGAGATAATGACCAGTGTTACTTTTGGA
ACCCCGGAACGCCGCAAAGGGAGCCTTGCCGATGTGGTGGACACACTGAAACAGAAGAAG
CTTGAGGAAATGACTCGGACTGAACAAGAGGATTCCTCCTGCATGGAAAAACTACTTTCA
AAAAGATTGGAAGGAAAAAATGGAGAGATTAAATACCAGTGAACTTCTTGGAGAAATTAA
AGGTACACCTGAGAGCCTGGCAGAAAAAGAACGGCAGCTCTCTACCATGATTACCCAGCT
GATCAGTTTACGGGAGCAGCTCCTGGCAGCGCATGATGAACAGAAAAAACTGGCAGCCTC
ACAAATTGAGAAACAACGGCAGCAAATGGACCTTGCTCGCCAACAGCAAGAACAGATTGC
AAGACAACAGCAGCAACTTCTGCAACAGCAGCACAAAATTAATCTCCTGCAGCAACAGAT
CCAGCAAATCTTTCCCTTCTCTGTTGACCCTATTCCAAAGCAAGCCGA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TTCCAATGAAGAGGCTGTGGCTACCAAAGGACAAAGGGGAGAAGCTAATTCCTGAAGTTG
AGAAGAATGTCTTCCAAGCAAGCCACCTCTCCATTTGCCTGTGCAGCTGATGGAGAGGAA
GCGATGACCCAAGATTTGACCTCAAGAGAAAAAGAAGAAGGCAGTGATCAACATGTGGCC
TCCCATCTGCCTCTGCATCCCATAATGCACAACAAACCTCACTCTGAGGAGCTACCAACA
CTTGTCAGTACCATTCAACAAGATGCTGACTGGGACAGCGTTCTGTCGTCTCAGCAAAGA
ATGGATTCAGAGAATAATAAGTTATGTTCCCTATATTCCTTCCGAAATACCTCTACCTCA
CCACATAAGCCTGACGAAGGGAGTCGGGACCGCGAGATAATGACCAGTGTTACTTTTGGA
ACCCCGGAACGCCGCAAAGGGAGCCTTGCCGATGTGGTGGACACACTGAAACAGAAGAAG
CTTGAGGAAATGACTCGGACTGAACAAGAGGATTCCTCCTGCATGGAAAAACTACTTTCA
AAAAGATTGGAAGGAAAAAATGGAGAGATTAAATACCAGTGAACTTCTTGGAGAAATTAA
AGGTACACCTGAGAGCCTGGCAGAAAAAGAACGGCAGCTCTCTACCATGATTACCCAGCT
GATCAGTTTACGGGAGCAGCTCCTGGCAGCGCATGATGAACAGAAAAAACTGGCAGCCTC
ACAAATTGAGAAACAACGGCAGCAAATGGACCTTGCTCGCCAACAGCAAGAACAGATTGC
AAGACAACAGCAGCAACTTCTGCAACAGCAGCACAAAATTAATCTCCTGCAGCAACAGAT
CCAGCAAATCTTTCCCTTCTCTGTTGACCCTATTCCAAAGCAAGCCGA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
44-304, gnl|bosTau2|chr15 (21379648-21379387) |
|
44-304, gnl|canFam2|chr21 (42271727-42272012) |
|
44-304, gnl|danRer3|chr7 (18024947-18024666) |
|
44-304, gnl|echTel1|scaffold_315608 (50773-51071) |
|
44-304, gnl|fr1|chrUn (51697912-51698188) |
|
44-304, gnl|galGal2|chr5 (8930798-8931099) |
|
44-304, gnl|hg17|chr11 (16319101-16319397) |
|
44-304, gnl|Hg17|chr11 (16319392-16319133) |
|
44-304, gnl|loxAfr1|scaffold_1832 (82919-82620) |
|
44-304, gnl|mm7|chr7 (111717484-111717783) |
|
44-304, gnl|Mm7|chr7 (111717778-111717516) |
|
44-304, gnl|monDom2|scaffold_10 (55624946-55624647) |
|
44-304, gnl|oryCun1|scaffold_201526 (72543-72842) |
|
44-304, gnl|panTro1|chr9 (16527741-16528037) |
|
44-304, gnl|rheMac2|chr14 (55587678-55587379) |
|
44-304, gnl|rn3|chr1 (174010045-174010341) |
|
44-304, gnl|tetNig1|chr5 (6877806-6878082) |
|
44-304, gnl|xenTro1|scaffold_705 (386883-386610) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
44-304, gnl|bosTau2|chr15 (21379648-21379387) |
|
44-304, gnl|canFam2|chr21 (42271727-42272012) |
|
44-304, gnl|danRer3|chr7 (18024947-18024666) |
|
44-304, gnl|echTel1|scaffold_315608 (50773-51071) |
|
44-304, gnl|fr1|chrUn (51697912-51698188) |
|
44-304, gnl|galGal2|chr5 (8930798-8931099) |
|
44-304, gnl|hg17|chr11 (16319101-16319397) |
|
44-304, gnl|Hg17|chr11 (16319392-16319133) |
|
44-304, gnl|loxAfr1|scaffold_1832 (82919-82620) |
|
44-304, gnl|mm7|chr7 (111717484-111717783) |
|
44-304, gnl|Mm7|chr7 (111717778-111717516) |
|
44-304, gnl|monDom2|scaffold_10 (55624946-55624647) |
|
44-304, gnl|oryCun1|scaffold_201526 (72543-72842) |
|
44-304, gnl|panTro1|chr9 (16527741-16528037) |
|
44-304, gnl|rheMac2|chr14 (55587678-55587379) |
|
44-304, gnl|rn3|chr1 (174010045-174010341) |
|
44-304, gnl|tetNig1|chr5 (6877806-6878082) |
|
44-304, gnl|xenTro1|scaffold_705 (386883-386610) |
