Ss1.1-Pig1-132M12.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTGCAGCATATCCCCCCACAGAAGGCCACCACGGGCATGAAGCCGGTCGACAACGGGTGT GTGGCCTTCGTTCTGAGGACAGGATTCTACACGTCCCAGGGCAAGCTGATGCGCACAATC CTCTTTGGTGTCAAGAGGGTGACGGCAAATAATCTGGAGACCTTCATCTTCATCCTCTTC CTCCTGGTCTTTGCCATTGCAGCAGCCGCCTACGTGTGGATCGAAGGTACCAAGGACCCC AGCCGGAACCGCTACAAGCTGTTTCTGGAATGCACACTGATTCTCACCTCCGTTGTGCCC CCCGAGCTACCCATTGAGCTATCTCTGGCCGTCAACACTTCCCTCATTGCTCTGGCCAAG CTCTACATGTACTGCACGGAGCCCTTCCGGATCCCCTTTGCCGGCAAGGTGGAGGTGTGC TGCTTCGACAAGACCGGGACCTTGACCAGTGACAGCCTGGTGGTGCGCGGGGTGGCCGGG CTCCGGGATGGGAAGGAGGTGACCCCTGTGTCCAACATCCCCATAGAAACACACCGGGCT CTGGCCTCATGCCACTCCCTCATGCAGCTGGATGACGGCACTCTCGTGGGTGACCCCCTT GAGAAAGCCATGCTGACAGCCGTAGACTGGACGCTGACCAAAGATGAGAAAGTATTCCCC CGAAGTATTAAAACTCAGGGGCTGAAAATTCACCAGCGCTTTCATTTTGCCAGTGCCCTA AAGCGAATGTCCGTGCTCGCCTCCTATGAGAAGCTTGGCTCCACTGATCTCTGCTACATC GCAGCCGTGAAGGGGGCCCCCGAAACCCTGCACTCCATGTTCGCCCAGTGCCCACCTGAC TACCACCACATTCACACGGAGATTTCCCGGGAAGGAGCCCGTGTTCTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTGCAGCATATCCCCCCACAGAAGGCCACCACGGGCATGAAGCCGGTCGACAACGGGTGT GTGGCCTTCGTTCTGAGGACAGGATTCTACACGTCCCAGGGCAAGCTGATGCGCACAATC CTCTTTGGTGTCAAGAGGGTGACGGCAAATAATCTGGAGACCTTCATCTTCATCCTCTTC CTCCTGGTCTTTGCCATTGCAGCAGCCGCCTACGTGTGGATCGAAGGTACCAAGGACCCC AGCCGGAACCGCTACAAGCTGTTTCTGGAATGCACACTGATTCTCACCTCCGTTGTGCCC CCCGAGCTACCCATTGAGCTATCTCTGGCCGTCAACACTTCCCTCATTGCTCTGGCCAAG CTCTACATGTACTGCACGGAGCCCTTCCGGATCCCCTTTGCCGGCAAGGTGGAGGTGTGC TGCTTCGACAAGACCGGGACCTTGACCAGTGACAGCCTGGTGGTGCGCGGGGTGGCCGGG CTCCGGGATGGGAAGGAGGTGACCCCTGTGTCCAACATCCCCATAGAAACACACCGGGCT CTGGCCTCATGCCACTCCCTCATGCAGCTGGATGACGGCACTCTCGTGGGTGACCCCCTT GAGAAAGCCATGCTGACAGCCGTAGACTGGACGCTGACCAAAGATGAGAAAGTATTCCCC CGAAGTATTAAAACTCAGGGGCTGAAAATTCACCAGCGCTTTCATTTTGCCAGTGCCCTA AAGCGAATGTCCGTGCTCGCCTCCTATGAGAAGCTTGGCTCCACTGATCTCTGCTACATC GCAGCCGTGAAGGGGGCCCCCGAAACCCTGCACTCCATGTTCGCCCAGTGCCCACCTGAC TACCACCACATTCACACGGAGATTTCCCGGGAAGGAGCCCGTGTTCTG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 51 entry(ies) | More info |
| Aligned organism(s): 51 entry(ies) | Help | Less info |
| 225-364, gnl|bosTau2|chr7 (3824068-3824207) | |
| 225-364, gnl|canFam2|chr20 (46626440-46626294) | |
| 225-364, gnl|danRer3|chrUn (12268318-12268172) | |
| 225-364, gnl|echTel1|scaffold_261477 (3936-4082) | |
| 225-364, gnl|fr1|chrUn (38794933-38794787) | |
| 225-364, gnl|galGal2|chrUn (129200595-129200741) | |
| 225-364, gnl|hg17|chr19 (19627120-19627266) | |
| 225-364, gnl|Hg17|chr19 (19627264-19627125) | |
| 225-364, gnl|mm7|chr8 (68253337-68253191) | |
| 225-364, gnl|Mm7|chr8 (68253191-68253330) | |
| 225-364, gnl|monDom2|scaffold_106 (1400230-1400376) | |
| 225-364, gnl|panTro1|chr20 (20704942-20705088) | |
| 225-364, gnl|rheMac2|chr19 (19352182-19352328) | |
| 225-364, gnl|rn3|chr16 (20109178-20109324) | |
| 225-364, gnl|tetNig1|chr3 (11204772-11204627) | |
| 225-364, gnl|xenTro1|scaffold_40 (2891492-2891638) | |
| 365-486, gnl|bosTau2|chr7 (3824287-3824408) | |
| 365-486, gnl|canFam2|chr20 (46626642-46626547) | |
| 365-486, gnl|danRer3|chrUn (12268523-12268431) | |
| 365-486, gnl|echTel1|scaffold_261477 (3740-3836) | |
| 365-486, gnl|fr1|chrUn (38795202-38795108) | |
| 365-486, gnl|galGal2|chrUn (129200252-129200347) | |
| 365-486, gnl|hg17|chr19 (19626922-19627017) | |
| 365-486, gnl|Hg17|chr19 (19627048-19626927) | |
| 365-486, gnl|loxAfr1|scaffold_18113 (23591-23496) | |
| 365-486, gnl|mm7|chr8 (68253549-68253454) | |
| 365-486, gnl|Mm7|chr8 (68253421-68253542) | |
| 365-486, gnl|monDom2|scaffold_106 (1400018-1400117) | |
| 365-486, gnl|panTro1|chr20 (20704744-20704839) | |
| 365-486, gnl|rheMac2|chr19 (19351986-19352081) | |
| 365-486, gnl|rn3|chr16 (20108968-20109063) | |
| 365-486, gnl|tetNig1|chr3 (11205007-11204913) | |
| 365-486, gnl|xenTro1|scaffold_40 (2890667-2890762) | |
| 642-828, gnl|bosTau2|chr7 (3825266-3825452) | |
| 642-828, gnl|canFam2|chr20 (46627733-46627503) | |
| 642-828, gnl|danRer3|chrUn (12272462-12272246) | |
| 642-828, gnl|echTel1|scaffold_261477 (2985-3215) | |
| 642-828, gnl|fr1|chrUn (38795846-38795609) | |
| 642-828, gnl|galGal2|chrUn (129199151-129199381) | |
| 642-828, gnl|hg17|chr19 (19625768-19625998) | |
| 642-828, gnl|Hg17|chr19 (19625955-19625769) | |
| 642-828, gnl|loxAfr1|scaffold_18113 (24437-24207) | |
| 642-828, gnl|mm7|chr8 (68254558-68254328) | |
| 642-828, gnl|Mm7|chr8 (68254369-68254555) | |
| 642-828, gnl|monDom2|scaffold_106 (1399020-1399249) | |
| 642-828, gnl|oryCun1|scaffold_99549 (1107-880) | |
| 642-828, gnl|panTro1|chr20 (20703588-20703818) | |
| 642-828, gnl|rheMac2|chr19 (19350856-19351086) | |
| 642-828, gnl|rn3|chr16 (20107982-20108212) | |
| 642-828, gnl|tetNig1|chr3 (11205630-11205448) | |
| 642-828, gnl|xenTro1|scaffold_40 (2885679-2885881) |
| Aligned organism(s): 51 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 225-364, gnl|bosTau2|chr7 (3824068-3824207) | |
| 225-364, gnl|canFam2|chr20 (46626440-46626294) | |
| 225-364, gnl|danRer3|chrUn (12268318-12268172) | |
| 225-364, gnl|echTel1|scaffold_261477 (3936-4082) | |
| 225-364, gnl|fr1|chrUn (38794933-38794787) | |
| 225-364, gnl|galGal2|chrUn (129200595-129200741) | |
| 225-364, gnl|hg17|chr19 (19627120-19627266) | |
| 225-364, gnl|Hg17|chr19 (19627264-19627125) | |
| 225-364, gnl|mm7|chr8 (68253337-68253191) | |
| 225-364, gnl|Mm7|chr8 (68253191-68253330) | |
| 225-364, gnl|monDom2|scaffold_106 (1400230-1400376) | |
| 225-364, gnl|panTro1|chr20 (20704942-20705088) | |
| 225-364, gnl|rheMac2|chr19 (19352182-19352328) | |
| 225-364, gnl|rn3|chr16 (20109178-20109324) | |
| 225-364, gnl|tetNig1|chr3 (11204772-11204627) | |
| 225-364, gnl|xenTro1|scaffold_40 (2891492-2891638) | |
| 365-486, gnl|bosTau2|chr7 (3824287-3824408) | |
| 365-486, gnl|canFam2|chr20 (46626642-46626547) | |
| 365-486, gnl|danRer3|chrUn (12268523-12268431) | |
| 365-486, gnl|echTel1|scaffold_261477 (3740-3836) | |
| 365-486, gnl|fr1|chrUn (38795202-38795108) | |
| 365-486, gnl|galGal2|chrUn (129200252-129200347) | |
| 365-486, gnl|hg17|chr19 (19626922-19627017) | |
| 365-486, gnl|Hg17|chr19 (19627048-19626927) | |
| 365-486, gnl|loxAfr1|scaffold_18113 (23591-23496) | |
| 365-486, gnl|mm7|chr8 (68253549-68253454) | |
| 365-486, gnl|Mm7|chr8 (68253421-68253542) | |
| 365-486, gnl|monDom2|scaffold_106 (1400018-1400117) | |
| 365-486, gnl|panTro1|chr20 (20704744-20704839) | |
| 365-486, gnl|rheMac2|chr19 (19351986-19352081) | |
| 365-486, gnl|rn3|chr16 (20108968-20109063) | |
| 365-486, gnl|tetNig1|chr3 (11205007-11204913) | |
| 365-486, gnl|xenTro1|scaffold_40 (2890667-2890762) | |
| 642-828, gnl|bosTau2|chr7 (3825266-3825452) | |
| 642-828, gnl|canFam2|chr20 (46627733-46627503) | |
| 642-828, gnl|danRer3|chrUn (12272462-12272246) | |
| 642-828, gnl|echTel1|scaffold_261477 (2985-3215) | |
| 642-828, gnl|fr1|chrUn (38795846-38795609) | |
| 642-828, gnl|galGal2|chrUn (129199151-129199381) | |
| 642-828, gnl|hg17|chr19 (19625768-19625998) | |
| 642-828, gnl|Hg17|chr19 (19625955-19625769) | |
| 642-828, gnl|loxAfr1|scaffold_18113 (24437-24207) | |
| 642-828, gnl|mm7|chr8 (68254558-68254328) | |
| 642-828, gnl|Mm7|chr8 (68254369-68254555) | |
| 642-828, gnl|monDom2|scaffold_106 (1399020-1399249) | |
| 642-828, gnl|oryCun1|scaffold_99549 (1107-880) | |
| 642-828, gnl|panTro1|chr20 (20703588-20703818) | |
| 642-828, gnl|rheMac2|chr19 (19350856-19351086) | |
| 642-828, gnl|rn3|chr16 (20107982-20108212) | |
| 642-828, gnl|tetNig1|chr3 (11205630-11205448) | |
| 642-828, gnl|xenTro1|scaffold_40 (2885679-2885881) |