Non-Coding RNA Search

Ss1.1-Pig1-132M14.5

Sequence:


               
               ATTTTCCTCGTGGTAGCAGTTACTGGGACCGCTGTGTGGTTGGGGGCTACCTCTCTCCCA
AGACAGTGGCAGACACATTTGAGAAGGTAGTGGCTGGCTCCATCAACTGGCCAGCCATCG
GGTCCCTCTTGGACTATGTGATTCGACCAGCGCCACCCCCCAGGGCCCTGACTCTGGAGG
TGCAGTATGAGCGTGACAAGCATCTCGTCATTGACTTCCTGCCATCAGTGACCCTTGGTG
ACACTGTCTTGGTGGCCAAACCACACCGGCTAGCCCAGTACGACAACCTGTGGCGGCTGA
GCCTGCGTCCTGCCGAGACGGCGCGCCTGCGGGCTCTGGACCAGGCCGACTCGGGCTGTC
GCTCTCTGTGCCTCAAGATCCTCAAGGCCATATGCAAGTCCACTCCGGCTCTGGGCCACC
TCACTGCCAGCCAGCTCACCAGCGTCATCCTCCACCTGGCCCAGGAGGAGGCTGACTGGT
CTCCAGACATGCTGGCCGACCGATTCCTGCAGGCCTTGAGGGGACTCATCAGCTACCTAG
AGGCCGGAGTTCTGCCCAGTGCCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTTTCCTCGTGGTAGCAGTTACTGGGACCGCTGTGTGGTTGGGGGCTACCTCTCTCCCA
AGACAGTGGCAGACACATTTGAGAAGGTAGTGGCTGGCTCCATCAACTGGCCAGCCATCG
GGTCCCTCTTGGACTATGTGATTCGACCAGCGCCACCCCCCAGGGCCCTGACTCTGGAGG
TGCAGTATGAGCGTGACAAGCATCTCGTCATTGACTTCCTGCCATCAGTGACCCTTGGTG
ACACTGTCTTGGTGGCCAAACCACACCGGCTAGCCCAGTACGACAACCTGTGGCGGCTGA
GCCTGCGTCCTGCCGAGACGGCGCGCCTGCGGGCTCTGGACCAGGCCGACTCGGGCTGTC
GCTCTCTGTGCCTCAAGATCCTCAAGGCCATATGCAAGTCCACTCCGGCTCTGGGCCACC
TCACTGCCAGCCAGCTCACCAGCGTCATCCTCCACCTGGCCCAGGAGGAGGCTGACTGGT
CTCCAGACATGCTGGCCGACCGATTCCTGCAGGCCTTGAGGGGACTCATCAGCTACCTAG
AGGCCGGAGTTCTGCCCAGTGCCC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|34783128|gb|AAH02587.2|

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|34783128|gb|AAH02587.2|

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               400-559, - strand, RNAz p=0.851583

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               400-559, - strand, RNAz p=0.851583

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-564, gnl|bosTau2|chr5 (26288-25725)
               

               
               1-564, gnl|Hg17|chr22 (38234155-38234718)
               

               
               1-564, gnl|Mm7|chr15 (80333943-80334506)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-564, gnl|bosTau2|chr5 (26288-25725)
               

               
               1-564, gnl|Hg17|chr22 (38234155-38234718)
               

               
               1-564, gnl|Mm7|chr15 (80333943-80334506)

	1-564, gnl\|bosTau2\|chr5 (26288-25725)
	1-564, gnl\|Hg17\|chr22 (38234155-38234718)
	1-564, gnl\|Mm7\|chr15 (80333943-80334506)