Non-Coding RNA Search

Ss1.1-Pig1-135C19.5

Sequence:


               
               GCAGCACGTCTGTCACTGGGCAAGTCCTCGGTGGCCCGCACAACCTCATGCGTCGCAGCA
CTGTGAGCCTTCTCGACACCTACCAAAAATGCGGACTCAAGCGGAAGAGTGAGGAGATTG
AGAACACGAGCAGCGTGCAGATCATCGAAGAGCACCCACCCATGATTCAGAACACCGCGA
GTGGGGCCACTGTCGCCACTGCCACCACCTCGACTGCCACCTCCAAAAACAGTGGCTCCA
ACAGCGAGGGGGACTACCAGCTGGTCCAGCATGAGGTGCTGTGCTCCATGACCAACACGT
ACGAAGTTCTGGAGTTCCTGGGCCGGGGGACGTTTGGGCAAGTGGTCAAGTGCTGGAAGC
GGGGCACCAATGAGATCGTGGCCATCAAGATCCTGAAGAACCACCCGTCCTACGCCCGCC
AAGGTCAGATCGAGGTGAGCATCCTGGCGCGCCTGAGCACGGAGAGCGCCGACGACTACA
ACTTCGTCCGCGCCTACGAGTGCTTCCAGCACAAGAACCACACGTGCTTGGTCTTCGAGA
TGTTGGAGCAGAACCTCTATGACTTTCTGAAGCAGAACAAGTTCAGCCCCTTGCCCCTCA
AATCCATTCGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCAGCACGTCTGTCACTGGGCAAGTCCTCGGTGGCCCGCACAACCTCATGCGTCGCAGCA
CTGTGAGCCTTCTCGACACCTACCAAAAATGCGGACTCAAGCGGAAGAGTGAGGAGATTG
AGAACACGAGCAGCGTGCAGATCATCGAAGAGCACCCACCCATGATTCAGAACACCGCGA
GTGGGGCCACTGTCGCCACTGCCACCACCTCGACTGCCACCTCCAAAAACAGTGGCTCCA
ACAGCGAGGGGGACTACCAGCTGGTCCAGCATGAGGTGCTGTGCTCCATGACCAACACGT
ACGAAGTTCTGGAGTTCCTGGGCCGGGGGACGTTTGGGCAAGTGGTCAAGTGCTGGAAGC
GGGGCACCAATGAGATCGTGGCCATCAAGATCCTGAAGAACCACCCGTCCTACGCCCGCC
AAGGTCAGATCGAGGTGAGCATCCTGGCGCGCCTGAGCACGGAGAGCGCCGACGACTACA
ACTTCGTCCGCGCCTACGAGTGCTTCCAGCACAAGAACCACACGTGCTTGGTCTTCGAGA
TGTTGGAGCAGAACCTCTATGACTTTCTGAAGCAGAACAAGTTCAGCCCCTTGCCCCTCA
AATCCATTCGCC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|12855641|dbj|BAB30405.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|12855641|dbj|BAB30405.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               1-612, gnl|bosTau2|chr4 (56789065-56788454)
               

               
               1-612, gnl|Hg17|chr7 (138869739-138869128)
               

               
               1-612, gnl|Mm7|chr6 (38749962-38749351)
               


               
               50-610, gnl|bosTau2|chr15 (38328877-38328309)
               

               
               50-610, gnl|Hg17|chr11 (33264867-33265435)
               

               
               50-610, gnl|Mm7|chr2 (104322302-104321734)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-612, gnl|bosTau2|chr4 (56789065-56788454)
               

               
               1-612, gnl|Hg17|chr7 (138869739-138869128)
               

               
               1-612, gnl|Mm7|chr6 (38749962-38749351)
               


               
               50-610, gnl|bosTau2|chr15 (38328877-38328309)
               

               
               50-610, gnl|Hg17|chr11 (33264867-33265435)
               

               
               50-610, gnl|Mm7|chr2 (104322302-104321734)

	1-612, gnl\|bosTau2\|chr4 (56789065-56788454)
	1-612, gnl\|Hg17\|chr7 (138869739-138869128)
	1-612, gnl\|Mm7\|chr6 (38749962-38749351)

	50-610, gnl\|bosTau2\|chr15 (38328877-38328309)
	50-610, gnl\|Hg17\|chr11 (33264867-33265435)
	50-610, gnl\|Mm7\|chr2 (104322302-104321734)