Ss1.1-Pig1-136J07.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGAACTGATGACCCGGGGGGACCTCAAAAGTTATCTCCGGTCTCTGAGACCAGAAATGGA GAATAATCCAGTCCTAGCACCTCCAAGCCTAAGCAAAATGATCCAGATGGCTGGAGAGAT TGCAGATGGCATGGCATACCTCAACGCCAATAAGTTTGTCCACAGAGACCTCGCTGCCCG GAACTGTATGGTGGCCGAAGACTTCACAGTCAAAATCGGAGATTTTGGGATGACGAGAGA CATCTATGAGACAGACTATTACCGCAAGGGAGGGAAAGGGCTGCTGCCTGTGCGCTGGAT GTCCCCTGAGTCCCTCAAGGACGGAGTCTTCACCACGCACTCTGATGTCTGGTCCTTCGG GGTCGTCCTCTGGGAGATTGCCACGCTGGCCGAGCAGCCATACCAGGGCTTGTCCAACGA GCAAGTCCTTCGCTTCGTCATGGAGGGCGGCCTTCTGGACAAGCCGGACAACTGTCCCGA CATGCTGTACGTATATCCTGGCTCATGTAAGAGCCAGGCCCTCTGGCCTGAGGCCTTCCT TCCTGGACATCATCAGCATCATCAAGGATGAGATGGAGCCTGGCTTCCGGGAAGTCTCCT TCTACTACAGTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGAACTGATGACCCGGGGGGACCTCAAAAGTTATCTCCGGTCTCTGAGACCAGAAATGGA GAATAATCCAGTCCTAGCACCTCCAAGCCTAAGCAAAATGATCCAGATGGCTGGAGAGAT TGCAGATGGCATGGCATACCTCAACGCCAATAAGTTTGTCCACAGAGACCTCGCTGCCCG GAACTGTATGGTGGCCGAAGACTTCACAGTCAAAATCGGAGATTTTGGGATGACGAGAGA CATCTATGAGACAGACTATTACCGCAAGGGAGGGAAAGGGCTGCTGCCTGTGCGCTGGAT GTCCCCTGAGTCCCTCAAGGACGGAGTCTTCACCACGCACTCTGATGTCTGGTCCTTCGG GGTCGTCCTCTGGGAGATTGCCACGCTGGCCGAGCAGCCATACCAGGGCTTGTCCAACGA GCAAGTCCTTCGCTTCGTCATGGAGGGCGGCCTTCTGGACAAGCCGGACAACTGTCCCGA CATGCTGTACGTATATCCTGGCTCATGTAAGAGCCAGGCCCTCTGGCCTGAGGCCTTCCT TCCTGGACATCATCAGCATCATCAAGGATGAGATGGAGCCTGGCTTCCGGGAAGTCTCCT TCTACTACAGTG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 385-504, + strand, RNAz p=0.589392 | |
| 387-504, - strand, RNAz p=0.858911 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 385-504, + strand, RNAz p=0.589392 | |
| 387-504, - strand, RNAz p=0.858911 |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 60-221, gnl|bosTau2|chr21 (1854009-1853848) | |
| 60-221, gnl|canFam2|chr3 (44928542-44928722) | |
| 60-221, gnl|danRer3|chr18 (25102957-25102789) | |
| 60-221, gnl|dasNov1|scaffold_76573 (40507-40685) | |
| 60-221, gnl|echTel1|scaffold_322027 (206774-206954) | |
| 60-221, gnl|fr1|chrUn (31195995-31196181) | |
| 60-221, gnl|galGal2|chr10 (17306609-17306429) | |
| 60-221, gnl|hg17|chr15 (97299952-97300132) | |
| 60-221, gnl|Hg17|chr15 (97299951-97300112) | |
| 60-221, gnl|loxAfr1|scaffold_60806 (10638-10822) | |
| 60-221, gnl|mm7|chr7 (64067975-64068155) | |
| 60-221, gnl|Mm7|chr7 (64067974-64068135) | |
| 60-221, gnl|monDom2|scaffold_12 (62311813-62311997) | |
| 60-221, gnl|oryCun1|scaffold_199508 (42944-43126) | |
| 60-221, gnl|panTro1|chr16 (98366063-98366243) | |
| 60-221, gnl|rheMac2|chr7 (78948378-78948558) | |
| 60-221, gnl|rn3|chr1 (123053286-123053466) | |
| 60-221, gnl|tetNig1|chr13 (3031656-3031517) | |
| 60-221, gnl|xenTro1|scaffold_308 (1141585-1141408) | |
| 346-504, gnl|bosTau2|chr21 (1845433-1845275) | |
| 346-504, gnl|canFam2|chr3 (44938826-44939003) | |
| 346-504, gnl|danRer3|chr18 (25100103-25099939) | |
| 346-504, gnl|dasNov1|scaffold_94993 (194-19) | |
| 346-504, gnl|echTel1|scaffold_322027 (212842-213020) | |
| 346-504, gnl|fr1|chrUn (31197484-31197631) | |
| 346-504, gnl|galGal2|chr10 (17299910-17299732) | |
| 346-504, gnl|hg17|chr15 (97309290-97309469) | |
| 346-504, gnl|Hg17|chr15 (97309320-97309478) | |
| 346-504, gnl|loxAfr1|scaffold_10745 (16064-15921) | |
| 346-504, gnl|mm7|chr7 (64074346-64074524) | |
| 346-504, gnl|Mm7|chr7 (64074376-64074533) | |
| 346-504, gnl|monDom2|scaffold_12 (62324781-62324940) | |
| 346-504, gnl|oryCun1|scaffold_117896 (778-955) | |
| 346-504, gnl|panTro1|chr16 (98375399-98375578) | |
| 346-504, gnl|rheMac2|chr7 (78957999-78958178) | |
| 346-504, gnl|rn3|chr1 (123060028-123060207) | |
| 346-504, gnl|tetNig1|chr13 (3030193-3030048) | |
| 346-504, gnl|xenTro1|scaffold_308 (1139802-1139619) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 60-221, gnl|bosTau2|chr21 (1854009-1853848) | |
| 60-221, gnl|canFam2|chr3 (44928542-44928722) | |
| 60-221, gnl|danRer3|chr18 (25102957-25102789) | |
| 60-221, gnl|dasNov1|scaffold_76573 (40507-40685) | |
| 60-221, gnl|echTel1|scaffold_322027 (206774-206954) | |
| 60-221, gnl|fr1|chrUn (31195995-31196181) | |
| 60-221, gnl|galGal2|chr10 (17306609-17306429) | |
| 60-221, gnl|hg17|chr15 (97299952-97300132) | |
| 60-221, gnl|Hg17|chr15 (97299951-97300112) | |
| 60-221, gnl|loxAfr1|scaffold_60806 (10638-10822) | |
| 60-221, gnl|mm7|chr7 (64067975-64068155) | |
| 60-221, gnl|Mm7|chr7 (64067974-64068135) | |
| 60-221, gnl|monDom2|scaffold_12 (62311813-62311997) | |
| 60-221, gnl|oryCun1|scaffold_199508 (42944-43126) | |
| 60-221, gnl|panTro1|chr16 (98366063-98366243) | |
| 60-221, gnl|rheMac2|chr7 (78948378-78948558) | |
| 60-221, gnl|rn3|chr1 (123053286-123053466) | |
| 60-221, gnl|tetNig1|chr13 (3031656-3031517) | |
| 60-221, gnl|xenTro1|scaffold_308 (1141585-1141408) | |
| 346-504, gnl|bosTau2|chr21 (1845433-1845275) | |
| 346-504, gnl|canFam2|chr3 (44938826-44939003) | |
| 346-504, gnl|danRer3|chr18 (25100103-25099939) | |
| 346-504, gnl|dasNov1|scaffold_94993 (194-19) | |
| 346-504, gnl|echTel1|scaffold_322027 (212842-213020) | |
| 346-504, gnl|fr1|chrUn (31197484-31197631) | |
| 346-504, gnl|galGal2|chr10 (17299910-17299732) | |
| 346-504, gnl|hg17|chr15 (97309290-97309469) | |
| 346-504, gnl|Hg17|chr15 (97309320-97309478) | |
| 346-504, gnl|loxAfr1|scaffold_10745 (16064-15921) | |
| 346-504, gnl|mm7|chr7 (64074346-64074524) | |
| 346-504, gnl|Mm7|chr7 (64074376-64074533) | |
| 346-504, gnl|monDom2|scaffold_12 (62324781-62324940) | |
| 346-504, gnl|oryCun1|scaffold_117896 (778-955) | |
| 346-504, gnl|panTro1|chr16 (98375399-98375578) | |
| 346-504, gnl|rheMac2|chr7 (78957999-78958178) | |
| 346-504, gnl|rn3|chr1 (123060028-123060207) | |
| 346-504, gnl|tetNig1|chr13 (3030193-3030048) | |
| 346-504, gnl|xenTro1|scaffold_308 (1139802-1139619) |