Non-Coding RNA Search

Ss1.1-Pig1-19C02.5

Sequence:


               
               GCCATTCTCCCCCCTGCTCCCCGCCCAGTCCCCCTCCCAACGTCTGACGCGACACGCCGA
AGCTTGGAGTCCCCTCCCGCAACCTACCTCTGGTCCTCCCGGGTGACGCTGGGTAGATAA
GTAGGAGGAGCGGAGAAAGGAGAAGGAGGGACGGGGAGGCCGCTGTGCTGCATTCTGGGA
AGGACGCTGCTCTGTCCACCGCACAGCCTCCTGGGAGTTGTAGTCGCGGTCCTGAGGCAA
CTGTTTACACCATGGATGGCACAAAAGAGAAGAATGACAGCACAAAGGAAAGGAATGACA
ACTACAAAGATGATCTTCTGTTTAGGATGGGACTTAATGATAATAAAGCTGGAATGGAAG
GATTGGATAAAGAGAAAATTAACAAAATTATAATGGAGGCCACAAAGGGGTCTAGATTTT
ATGGAAATGAGCTCAAGAGAGAAAAGCAGGTCAACCAACGAATTGAAAATATGATGCAAC
AAAAAGCTCAGATTACCAGCCAGCAGCTAAGGAAAGCACAATTACAGGTTGACAGATTTG
CAATGGAATTGGAACAGAGCCGGGATCTGAGCAATACCATAGTGCACATTGACATGGATG
CTTTCTATGCAGCCGTAGAAATGAGGGACAATCCAGAACTAAGGGATAAGCCCATTGCTG
TAGGATCAAGGAATATGTTGTCTACTTCGAATTACCATGCAAGGAAGTTTGGTGTTCGTG
GAGCCATGCCAGGATTTATTGCTAAAAGACTCTGCCCTCAACTGATTATAGTGCCCCCCA
ATTTTGACAAATACCGAGCTGTGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCATTCTCCCCCCTGCTCCCCGCCCAGTCCCCCTCCCAACGTCTGACGCGACACGCCGA
AGCTTGGAGTCCCCTCCCGCAACCTACCTCTGGTCCTCCCGGGTGACGCTGGGTAGATAA
GTAGGAGGAGCGGAGAAAGGAGAAGGAGGGACGGGGAGGCCGCTGTGCTGCATTCTGGGA
AGGACGCTGCTCTGTCCACCGCACAGCCTCCTGGGAGTTGTAGTCGCGGTCCTGAGGCAA
CTGTTTACACCATGGATGGCACAAAAGAGAAGAATGACAGCACAAAGGAAAGGAATGACA
ACTACAAAGATGATCTTCTGTTTAGGATGGGACTTAATGATAATAAAGCTGGAATGGAAG
GATTGGATAAAGAGAAAATTAACAAAATTATAATGGAGGCCACAAAGGGGTCTAGATTTT
ATGGAAATGAGCTCAAGAGAGAAAAGCAGGTCAACCAACGAATTGAAAATATGATGCAAC
AAAAAGCTCAGATTACCAGCCAGCAGCTAAGGAAAGCACAATTACAGGTTGACAGATTTG
CAATGGAATTGGAACAGAGCCGGGATCTGAGCAATACCATAGTGCACATTGACATGGATG
CTTTCTATGCAGCCGTAGAAATGAGGGACAATCCAGAACTAAGGGATAAGCCCATTGCTG
TAGGATCAAGGAATATGTTGTCTACTTCGAATTACCATGCAAGGAAGTTTGGTGTTCGTG
GAGCCATGCCAGGATTTATTGCTAAAAGACTCTGCCCTCAACTGATTATAGTGCCCCCCA
ATTTTGACAAATACCGAGCTGTGA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|14278876|dbj|BAB58975.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|14278876|dbj|BAB58975.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               2-243, gnl|bosTau2|chr10 (1707052-1706811)
               

               
               2-243, gnl|Hg17|chr5 (74843251-74843495)
               

               
               2-243, gnl|Mm7|chr13 (93612057-93611847)
               


               
               526-680, gnl|bosTau2|chr10 (1653398-1653244)
               

               
               526-680, gnl|Hg17|chr5 (74900919-74901073)
               

               
               526-680, gnl|Mm7|chr13 (93577723-93577569)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-243, gnl|bosTau2|chr10 (1707052-1706811)
               

               
               2-243, gnl|Hg17|chr5 (74843251-74843495)
               

               
               2-243, gnl|Mm7|chr13 (93612057-93611847)
               


               
               526-680, gnl|bosTau2|chr10 (1653398-1653244)
               

               
               526-680, gnl|Hg17|chr5 (74900919-74901073)
               

               
               526-680, gnl|Mm7|chr13 (93577723-93577569)

	2-243, gnl\|bosTau2\|chr10 (1707052-1706811)
	2-243, gnl\|Hg17\|chr5 (74843251-74843495)
	2-243, gnl\|Mm7\|chr13 (93612057-93611847)

	526-680, gnl\|bosTau2\|chr10 (1653398-1653244)
	526-680, gnl\|Hg17\|chr5 (74900919-74901073)
	526-680, gnl\|Mm7\|chr13 (93577723-93577569)