Ss1.1-Pig1-19N03.5
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GAGCCTCAGTATTTGTAAGGCAGGGAGTGGGCATCAAGCAGTGTCTTTGGATGGTCTTAG
TGTTATGGAGGGACGGTGCTTAGCATGGTGTTCTGAAAGCCTCAGTGTCCCCACTTGCGG
GAAAAAGTGGCCCTTTCTTGTTGTGATGGACTATGTTATATTCTTGATTCAGGAATTTCA
GAAGGAGCTGAGCCAGTGGAGGAAAGACCCCAGCGGAAGCAAGAAGAAGCCCAAATACTC
TTACAAGACAGTGGAAGAGTTAAAAGCCAAGGGCAGAATTAGCAAGAAGCTCTCTGCTCC
CCAGAAAGAGATTTCTCAGGTCAAGGTCATAGACATGACGGGCCGGGAGCAGAAGGTCTA
CTATAGCTACAGCCAGATCAGCCACAAGCACAATGTCCCAGATGACGGGCTCCCACTGCA
GTCACAGCTGCCCCAGCCCGGCAAGGAGGCCAAGGCCCCCGGCTTTGCGCTGCCAGAGCT
GGAGCACAACCTGCAACTGCTCATTGAGCTCACGGAGCAGGAGATCATCCAGAACGACCG |
Blue-coloured subsequences are predicted RNA structures by RNAz
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GAGCCTCAGTATTTGTAAGGCAGGGAGTGGGCATCAAGCAGTGTCTTTGGATGGTCTTAG
TGTTATGGAGGGACGGTGCTTAGCATGGTGTTCTGAAAGCCTCAGTGTCCCCACTTGCGG
GAAAAAGTGGCCCTTTCTTGTTGTGATGGACTATGTTATATTCTTGATTCAGGAATTTCA
GAAGGAGCTGAGCCAGTGGAGGAAAGACCCCAGCGGAAGCAAGAAGAAGCCCAAATACTC
TTACAAGACAGTGGAAGAGTTAAAAGCCAAGGGCAGAATTAGCAAGAAGCTCTCTGCTCC
CCAGAAAGAGATTTCTCAGGTCAAGGTCATAGACATGACGGGCCGGGAGCAGAAGGTCTA
CTATAGCTACAGCCAGATCAGCCACAAGCACAATGTCCCAGATGACGGGCTCCCACTGCA
GTCACAGCTGCCCCAGCCCGGCAAGGAGGCCAAGGCCCCCGGCTTTGCGCTGCCAGAGCT
GGAGCACAACCTGCAACTGCTCATTGAGCTCACGGAGCAGGAGATCATCCAGAACGACCG |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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126-327, gnl|bosTau2|chr14 (9532796-9532598) |
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126-327, gnl|canFam2|chr26 (23213319-23213482) |
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126-327, gnl|echTel1|scaffold_322924 (81038-80893) |
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126-327, gnl|galGal2|chr15 (7119962-7120120) |
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126-327, gnl|hg17|chr22 (25222415-25222578) |
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126-327, gnl|Hg17|chr22 (25222593-25222418) |
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126-327, gnl|loxAfr1|scaffold_30011 (24191-24354) |
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126-327, gnl|mm7|chr5 (111518530-111518367) |
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126-327, gnl|Mm7|chr5 (111518327-111518525) |
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126-327, gnl|monDom2|scaffold_151 (1570566-1570726) |
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126-327, gnl|oryCun1|scaffold_202883 (83576-83739) |
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126-327, gnl|panTro1|chr23 (25305417-25305580) |
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126-327, gnl|rheMac2|chr10 (70340243-70340406) |
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126-327, gnl|rn3|chr19 (14318165-14318002) |
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126-327, gnl|tetNig1|chr12 (6037886-6038058) |
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126-327, gnl|xenTro1|scaffold_76 (100569-100730) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
126-327, gnl|bosTau2|chr14 (9532796-9532598) |
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126-327, gnl|canFam2|chr26 (23213319-23213482) |
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126-327, gnl|echTel1|scaffold_322924 (81038-80893) |
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126-327, gnl|galGal2|chr15 (7119962-7120120) |
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126-327, gnl|hg17|chr22 (25222415-25222578) |
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126-327, gnl|Hg17|chr22 (25222593-25222418) |
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126-327, gnl|loxAfr1|scaffold_30011 (24191-24354) |
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126-327, gnl|mm7|chr5 (111518530-111518367) |
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126-327, gnl|Mm7|chr5 (111518327-111518525) |
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126-327, gnl|monDom2|scaffold_151 (1570566-1570726) |
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126-327, gnl|oryCun1|scaffold_202883 (83576-83739) |
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126-327, gnl|panTro1|chr23 (25305417-25305580) |
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126-327, gnl|rheMac2|chr10 (70340243-70340406) |
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126-327, gnl|rn3|chr19 (14318165-14318002) |
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126-327, gnl|tetNig1|chr12 (6037886-6038058) |
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126-327, gnl|xenTro1|scaffold_76 (100569-100730) |
