Non-Coding RNA Search

Ss1.1-Pig1-1C18.5

Sequence:


               
               GGTCTCCGGGCGGACGAGGGAACTCAGCAGCGGCGGCGGCGGCGGCGGCGGCTTTACGCT
CAAGAGATTGGCATCCCTGCCGGCTTGGCTCGGAGCAAGGTGACCGTCCTCTCCTGGCAC
CTTGGCTGAGCGGGGCCGTGCGGCCGGGTGGAGTCGGCGGCCCAGCAGACCGGAGGGAAC
AATTGACAATCACGTTACTATGAGTCTGCTACATTGTGAAAACAGCTGTGGATCCAGCCA
GTCTGAGAGCGACTGCTGTGCTGCCATGGCTGCCAGCTCCTGTGGTGCTGCAGCGAAAGA
TGACGGTGTGAGTGGAACTGCCAGCACAGGGAATCTCTCCAGCTCTTTTATGGAAGAGAT
CCAGGGATATGATGTGGAGTTTGACCCACCCCTGGAAAGCAAATATGAGTGCCCCATCTG
CTTGATGGCGTTACGGGAAGCAGTGCACACCCCCTGTGGTCATAGGTTCTGCAAAGCCTG
CATCATCAAGTCAATAAGGGATGCAGGTCACAAATGTCCAGTTGACAATGAAATACTGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGTCTCCGGGCGGACGAGGGAACTCAGCAGCGGCGGCGGCGGCGGCGGCGGCTTTACGCT
CAAGAGATTGGCATCCCTGCCGGCTTGGCTCGGAGCAAGGTGACCGTCCTCTCCTGGCAC
CTTGGCTGAGCGGGGCCGTGCGGCCGGGTGGAGTCGGCGGCCCAGCAGACCGGAGGGAAC
AATTGACAATCACGTTACTATGAGTCTGCTACATTGTGAAAACAGCTGTGGATCCAGCCA
GTCTGAGAGCGACTGCTGTGCTGCCATGGCTGCCAGCTCCTGTGGTGCTGCAGCGAAAGA
TGACGGTGTGAGTGGAACTGCCAGCACAGGGAATCTCTCCAGCTCTTTTATGGAAGAGAT
CCAGGGATATGATGTGGAGTTTGACCCACCCCTGGAAAGCAAATATGAGTGCCCCATCTG
CTTGATGGCGTTACGGGAAGCAGTGCACACCCCCTGTGGTCATAGGTTCTGCAAAGCCTG
CATCATCAAGTCAATAAGGGATGCAGGTCACAAATGTCCAGTTGACAATGAAATACTGCT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|55633851|ref|XP_507804.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|55633851|ref|XP_507804.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               36-174, gnl|bosTau2|chr15 (41209807-41209942)
               

               
               36-174, gnl|Hg17|chr11 (36488335-36488177)
               

               
               36-174, gnl|Mm7|chr2 (101529203-101529333)
               


               
               177-499, gnl|bosTau2|chr15 (41217315-41217637)
               

               
               177-499, gnl|Hg17|chr11 (36479664-36479345)
               

               
               177-499, gnl|Mm7|chr2 (101535194-101535513)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               36-174, gnl|bosTau2|chr15 (41209807-41209942)
               

               
               36-174, gnl|Hg17|chr11 (36488335-36488177)
               

               
               36-174, gnl|Mm7|chr2 (101529203-101529333)
               


               
               177-499, gnl|bosTau2|chr15 (41217315-41217637)
               

               
               177-499, gnl|Hg17|chr11 (36479664-36479345)
               

               
               177-499, gnl|Mm7|chr2 (101535194-101535513)

	36-174, gnl\|bosTau2\|chr15 (41209807-41209942)
	36-174, gnl\|Hg17\|chr11 (36488335-36488177)
	36-174, gnl\|Mm7\|chr2 (101529203-101529333)

	177-499, gnl\|bosTau2\|chr15 (41217315-41217637)
	177-499, gnl\|Hg17\|chr11 (36479664-36479345)
	177-499, gnl\|Mm7\|chr2 (101535194-101535513)