Non-Coding RNA Search

Ss1.1-Pig1-20B24.5

Sequence:


               
               TATTAGTCCATTTCCCCTTCTCCACGCGTGGGTGAAACTTGATTTAACTTTAACAAGTAG
AGATCTGAATTTGAGTCATTTTCTTCAAACAGATTATCATGGAACTAACTCTACTAATAC
GTCTTTAAACACTAATTTTGTAGTACCATGTTTGCATGCCTTCCTTTGGAAAGATACCAG
TTGTACCGATGACCTCTAGTGCATGCCCTTCTCTGTCTAGATCTGGAGTGGTACGCCTCG
GCACACAGTGTAAGTTTTGTTCTTCTGATGCTGACAAATCTTCTTTCATGGAAATATGTG
GGCTGAGGGGGTGGGGCACCAAGAAATATTTGTAATATTTACCCAGACCTGTATGTTAAA
TACAGTTGTGAGGAAACAAGTTGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TATTAGTCCATTTCCCCTTCTCCACGCGTGGGTGAAACTTGATTTAACTTTAACAAGTAG
AGATCTGAATTTGAGTCATTTTCTTCAAACAGATTATCATGGAACTAACTCTACTAATAC
GTCTTTAAACACTAATTTTGTAGTACCATGTTTGCATGCCTTCCTTTGGAAAGATACCAG
TTGTACCGATGACCTCTAGTGCATGCCCTTCTCTGTCTAGATCTGGAGTGGTACGCCTCG
GCACACAGTGTAAGTTTTGTTCTTCTGATGCTGACAAATCTTCTTTCATGGAAATATGTG
GGCTGAGGGGGTGGGGCACCAAGAAATATTTGTAATATTTACCCAGACCTGTATGTTAAA
TACAGTTGTGAGGAAACAAGTTGG

Aligned organism(s): 13 entry(ies)

More info

Aligned organism(s): 13 entry(ies)

Help | Less info


               
               1-384, gnl|bosTau2|chr4 (36919932-36920322)
               

               
               1-384, gnl|canFam2|chr14 (45754951-45755342)
               

               
               1-384, gnl|dasNov1|scaffold_12143 (42948-42563)
               

               
               1-384, gnl|echTel1|scaffold_283978 (5855-5513)
               

               
               1-384, gnl|hg17|chr7 (29832822-29833224)
               

               
               1-384, gnl|Hg17|chr7 (29833302-29832918)
               

               
               1-384, gnl|loxAfr1|scaffold_32870 (1104-1465)
               

               
               1-384, gnl|mm7|chr6 (54550093-54550499)
               

               
               1-384, gnl|Mm7|chr6 (54550563-54550210)
               

               
               1-384, gnl|oryCun1|scaffold_207221 (143882-144233)
               

               
               1-384, gnl|panTro1|chr6 (30946303-30946700)
               

               
               1-384, gnl|rheMac2|chr3 (96183098-96182710)
               

               
               1-384, gnl|rn3|chr4 (83279653-83280071)

Aligned organism(s): 13 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-384, gnl|bosTau2|chr4 (36919932-36920322)
               

               
               1-384, gnl|canFam2|chr14 (45754951-45755342)
               

               
               1-384, gnl|dasNov1|scaffold_12143 (42948-42563)
               

               
               1-384, gnl|echTel1|scaffold_283978 (5855-5513)
               

               
               1-384, gnl|hg17|chr7 (29832822-29833224)
               

               
               1-384, gnl|Hg17|chr7 (29833302-29832918)
               

               
               1-384, gnl|loxAfr1|scaffold_32870 (1104-1465)
               

               
               1-384, gnl|mm7|chr6 (54550093-54550499)
               

               
               1-384, gnl|Mm7|chr6 (54550563-54550210)
               

               
               1-384, gnl|oryCun1|scaffold_207221 (143882-144233)
               

               
               1-384, gnl|panTro1|chr6 (30946303-30946700)
               

               
               1-384, gnl|rheMac2|chr3 (96183098-96182710)
               

               
               1-384, gnl|rn3|chr4 (83279653-83280071)

	1-384, gnl\|bosTau2\|chr4 (36919932-36920322)
	1-384, gnl\|canFam2\|chr14 (45754951-45755342)
	1-384, gnl\|dasNov1\|scaffold_12143 (42948-42563)
	1-384, gnl\|echTel1\|scaffold_283978 (5855-5513)
	1-384, gnl\|hg17\|chr7 (29832822-29833224)
	1-384, gnl\|Hg17\|chr7 (29833302-29832918)
	1-384, gnl\|loxAfr1\|scaffold_32870 (1104-1465)
	1-384, gnl\|mm7\|chr6 (54550093-54550499)
	1-384, gnl\|Mm7\|chr6 (54550563-54550210)
	1-384, gnl\|oryCun1\|scaffold_207221 (143882-144233)
	1-384, gnl\|panTro1\|chr6 (30946303-30946700)
	1-384, gnl\|rheMac2\|chr3 (96183098-96182710)
	1-384, gnl\|rn3\|chr4 (83279653-83280071)